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The map label for this gene is rpiA

Identifier: 170077884

GI number: 170077884

Start: 1314884

End: 1315585

Strand: Direct

Name: rpiA

Synonym: SYNPCC7002_A1269

Alternate gene names: 170077884

Gene position: 1314884-1315585 (Clockwise)

Preceding gene: 170077883

Following gene: 170077886

Centisome position: 43.71

GC content: 50.85

Gene sequence:

>702_bases
ATGGATGCCGTCACGGTCATGAAACAAGAAGTGGGCAAAGTCGCCGCCGCCCTAGTCCAGTCCAACTCAGTGGTTGGTTT
AGGCACTGGGTCAACCACCGCCTATGCAATTCAATACATCGGTGAGCGTTTAGCCGCAGGTGAACTAGAGAATATTGTCG
GGATTCCCACCTCCTTCCAGGCAGAAGTTCTCGCAAAACAGTACAAAATTCCCCTAAGCAGTTTGGATGCCGTTGATCAT
ATTGATGTGGCCATTGATGGGGCCGATGAGGTCGATCCCCAGAAAAATTTAATTAAAGGGGGCGGTGCGGCCCACACCCG
GGAAAAAGTTGTGGATGCCCTCGCCAACAAATTCGTCGTCGTGGTAGATAGCGGCAAGCTGGTTGATCGCTTGGGTTCAA
CCTTTTTATTACCCGTGGAAGTGATTCCCATGGCCATTACGCCAGTGATGCGTCAACTAGAAGCATTGGGTGGTAAGCCA
GAACTCCGAATGGGAGTCAAAAAAGCTGGCCCCGTGGTGACCGATGAAGGAAATTTAGTCGTGGATCTTAAATTTGCTGG
CATCGACGACCCGGCAACCCTAGAGCAAAAGATTAATAATATCCCTGGCGTCCTGGAAAACGGTCTGTTTGTCGGGGTGG
CTGATGTGATTTTGGTCGGCGAAATTATTGACGGACAACCCCGCGTCCGGGAAATTCAGTAG

Upstream 100 bases:

>100_bases
TTTCCTGCTGCAGGTCGTGTGGCAGGATTTGTTTTGTTTACGCCAAAAAATTTTTCAGCATTAATTTTTTTATTCAACTT
TTTTCTCGGAGGGATACACA

Downstream 100 bases:

>100_bases
CGTTTTTTTGTTGAACAGGTAAGCCTGGGCCTCCTCATTGCAGGGGGTTTTTGTCTTGTTATGTTTGGCTTAGGAGAGTG
ATGGCCCGCCGGATCCATTC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQAEVLAKQYKIPLSSLDAVDH
IDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKP
ELRMGVKKAGPVVTDEGNLVVDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ

Sequences:

>Translated_233_residues
MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQAEVLAKQYKIPLSSLDAVDH
IDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKP
ELRMGVKKAGPVVTDEGNLVVDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ
>Mature_233_residues
MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQAEVLAKQYKIPLSSLDAVDH
IDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKP
ELRMGVKKAGPVVTDEGNLVVDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family

Homologues:

Organism=Homo sapiens, GI94536842, Length=216, Percent_Identity=47.6851851851852, Blast_Score=182, Evalue=2e-46,
Organism=Escherichia coli, GI1789280, Length=215, Percent_Identity=44.6511627906977, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17551758, Length=212, Percent_Identity=41.5094339622642, Blast_Score=163, Evalue=9e-41,
Organism=Saccharomyces cerevisiae, GI6324669, Length=222, Percent_Identity=38.2882882882883, Blast_Score=126, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281364072, Length=213, Percent_Identity=45.0704225352113, Blast_Score=166, Evalue=1e-41,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): RPIA_SYNP2 (B1XL11)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734522.1
- ProteinModelPortal:   B1XL11
- SMR:   B1XL11
- GeneID:   6055621
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1269
- HOGENOM:   HBG515603
- OMA:   HAREKIV
- ProtClustDB:   PRK00702
- HAMAP:   MF_00170
- InterPro:   IPR004788
- InterPro:   IPR020672
- PANTHER:   PTHR11934
- TIGRFAMs:   TIGR00021

Pfam domain/function: PF06026 Rib_5-P_isom_A

EC number: =5.3.1.6

Molecular weight: Translated: 24499; Mature: 24499

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQ
CCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHH
AEVLAKQYKIPLSSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVV
HHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEE
VVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKPELRMGVKKAGPVVTDEGNLV
EEECCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCEEECCCCEE
VDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ
EEEEECCCCCHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQ
CCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHH
AEVLAKQYKIPLSSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVV
HHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEE
VVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKPELRMGVKKAGPVVTDEGNLV
EEECCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCEEECCCCEE
VDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ
EEEEECCCCCHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA