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The map label for this gene is 170077883

Identifier: 170077883

GI number: 170077883

Start: 1314330

End: 1314767

Strand: Direct

Name: 170077883

Synonym: SYNPCC7002_A1268

Alternate gene names: NA

Gene position: 1314330-1314767 (Clockwise)

Preceding gene: 170077881

Following gene: 170077884

Centisome position: 43.69

GC content: 53.65

Gene sequence:

>438_bases
ATGTCCGTACGTTTGTATGTCGGCAATCTGCCCAAAGACGTCGTCGAAAAACAAGCCCTGGTTGATTTCTTTGTTGAAGC
AGGCGAAACCGCAACCACCAAAGTGATCAAAGACCGGAAAACAGGCAAATGTCGTGGTTTTGCCTTCGTTACCGTCCCCA
CCGACGAAGAAGCCGATGCTTTCATCGAAAAGTACAATGGCCAATCCTTCATGGACAGTCCCCTCAAAATTGAGAAGGCT
CTCCCCCGTAGCAAAGGCGACGACAAGCCAGCCGAAGCCAGCAACACCAAAGGCGGCGGCAAGCGCAAGCGCAGTGGTGG
CAGCAGCAAGAAGCAATCCAGCTACGGTGATGCAACTTCCGCTCAACCCGACCCCCGCTGGGCCAGCGAACTGGAGAAGC
TCAAAGACATGCTCCAACAGCAAACCGCTAACGTTTAG

Upstream 100 bases:

>100_bases
GGTCAAAGGCGATCGCCACATTATCAGCACTTGATCCCTGAACGAGTTTGTCCCAAAACCAGTTTTTCATCTAACCCAAC
CAACATCTAGGAGGTTCCCT

Downstream 100 bases:

>100_bases
GCCTTGGGTCATTGATTTTCCTGCTGCAGGTCGTGTGGCAGGATTTGTTTTGTTTACGCCAAAAAATTTTTCAGCATTAA
TTTTTTTATTCAACTTTTTT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSVRLYVGNLPKDVVEKQALVDFFVEAGETATTKVIKDRKTGKCRGFAFVTVPTDEEADAFIEKYNGQSFMDSPLKIEKA
LPRSKGDDKPAEASNTKGGGKRKRSGGSSKKQSSYGDATSAQPDPRWASELEKLKDMLQQQTANV

Sequences:

>Translated_145_residues
MSVRLYVGNLPKDVVEKQALVDFFVEAGETATTKVIKDRKTGKCRGFAFVTVPTDEEADAFIEKYNGQSFMDSPLKIEKA
LPRSKGDDKPAEASNTKGGGKRKRSGGSSKKQSSYGDATSAQPDPRWASELEKLKDMLQQQTANV
>Mature_144_residues
SVRLYVGNLPKDVVEKQALVDFFVEAGETATTKVIKDRKTGKCRGFAFVTVPTDEEADAFIEKYNGQSFMDSPLKIEKAL
PRSKGDDKPAEASNTKGGGKRKRSGGSSKKQSSYGDATSAQPDPRWASELEKLKDMLQQQTANV

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15864; Mature: 15733

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLYVGNLPKDVVEKQALVDFFVEAGETATTKVIKDRKTGKCRGFAFVTVPTDEEADA
CCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH
FIEKYNGQSFMDSPLKIEKALPRSKGDDKPAEASNTKGGGKRKRSGGSSKKQSSYGDATS
HHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPDPRWASELEKLKDMLQQQTANV
CCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVRLYVGNLPKDVVEKQALVDFFVEAGETATTKVIKDRKTGKCRGFAFVTVPTDEEADA
CEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH
FIEKYNGQSFMDSPLKIEKALPRSKGDDKPAEASNTKGGGKRKRSGGSSKKQSSYGDATS
HHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPDPRWASELEKLKDMLQQQTANV
CCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA