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The map label for this gene is 170077845

Identifier: 170077845

GI number: 170077845

Start: 1273106

End: 1273732

Strand: Reverse

Name: 170077845

Synonym: SYNPCC7002_A1229

Alternate gene names: NA

Gene position: 1273732-1273106 (Counterclockwise)

Preceding gene: 170077848

Following gene: 170077842

Centisome position: 42.34

GC content: 51.36

Gene sequence:

>627_bases
ATGTTTCAGCAGCGATCGCCAAAGACAGGATTAGCAGAGAACTGCGCGGCAGACCAGCCCCGGGACCGAATTTTAAAGGC
GGCACTACAGTTATTCGCCCAAAAGGGATACGAAAAAACCACAACGAAGGAATTAGCCGCCAAGGCCCAGGTGGCAGAGG
GAACTTTGTTTCGTCACTTTAGCAACAAAAAAACCATCCTCGTGGAAGTGGCAACCCTCGGCTGGATGGATCTCCTCACG
GATTTTTTAACGGAAATGAGTGAGATGGGCAGCTACAAGGCGATCGCCCAGGTGATGCGCCACCGGATGCTGAATATGCA
CAAAAATAAAAATCTGCTCAAGGTTTGTTTCATCGAAACCCAGGCCCACCCAGAACTCCAGGAAAAAATCCAGGCAGAAG
TGATCGATAAAATGACAGGCATTGCAGAGGCGTTTTTCGAGTCGGCCATGGAAAAAGGCATTTACCGGAAAATGAACCCC
CACATTGTCGCCCAGGTCTTTTTGGGGATGTTTGCGATCGCCGGCTTTTCTGACGTGACCATCGCTGACCCCCACGCCAC
CCCAGAGTCACTCCGGGAAATGGCAGAAGGCATCGCCGACATTTTTCTCCATGGGGTCTTGGCTTAG

Upstream 100 bases:

>100_bases
GAGCACCTCAAGTTTTATGAAGGCTAAGGGAGGGGATTTCGTCTCCTAAGACACAATAAAAGTAGTTAGATACTGTATAT
GGGACGTAGGAAAGATGGTC

Downstream 100 bases:

>100_bases
AACCCAAAGCAAGGGGCGCATCCCAATAAGAACACGCCCACCCTTAAACATTGTCAATTTACAGCACTCTATTTGTAAGC
TTTGACGCACTCTTCCACGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR Family Protein; AcrR Family Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MFQQRSPKTGLAENCAADQPRDRILKAALQLFAQKGYEKTTTKELAAKAQVAEGTLFRHFSNKKTILVEVATLGWMDLLT
DFLTEMSEMGSYKAIAQVMRHRMLNMHKNKNLLKVCFIETQAHPELQEKIQAEVIDKMTGIAEAFFESAMEKGIYRKMNP
HIVAQVFLGMFAIAGFSDVTIADPHATPESLREMAEGIADIFLHGVLA

Sequences:

>Translated_208_residues
MFQQRSPKTGLAENCAADQPRDRILKAALQLFAQKGYEKTTTKELAAKAQVAEGTLFRHFSNKKTILVEVATLGWMDLLT
DFLTEMSEMGSYKAIAQVMRHRMLNMHKNKNLLKVCFIETQAHPELQEKIQAEVIDKMTGIAEAFFESAMEKGIYRKMNP
HIVAQVFLGMFAIAGFSDVTIADPHATPESLREMAEGIADIFLHGVLA
>Mature_208_residues
MFQQRSPKTGLAENCAADQPRDRILKAALQLFAQKGYEKTTTKELAAKAQVAEGTLFRHFSNKKTILVEVATLGWMDLLT
DFLTEMSEMGSYKAIAQVMRHRMLNMHKNKNLLKVCFIETQAHPELQEKIQAEVIDKMTGIAEAFFESAMEKGIYRKMNP
HIVAQVFLGMFAIAGFSDVTIADPHATPESLREMAEGIADIFLHGVLA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23305; Mature: 23305

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQQRSPKTGLAENCAADQPRDRILKAALQLFAQKGYEKTTTKELAAKAQVAEGTLFRHF
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SNKKTILVEVATLGWMDLLTDFLTEMSEMGSYKAIAQVMRHRMLNMHKNKNLLKVCFIET
CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
QAHPELQEKIQAEVIDKMTGIAEAFFESAMEKGIYRKMNPHIVAQVFLGMFAIAGFSDVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCE
IADPHATPESLREMAEGIADIFLHGVLA
EECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFQQRSPKTGLAENCAADQPRDRILKAALQLFAQKGYEKTTTKELAAKAQVAEGTLFRHF
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SNKKTILVEVATLGWMDLLTDFLTEMSEMGSYKAIAQVMRHRMLNMHKNKNLLKVCFIET
CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
QAHPELQEKIQAEVIDKMTGIAEAFFESAMEKGIYRKMNPHIVAQVFLGMFAIAGFSDVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCE
IADPHATPESLREMAEGIADIFLHGVLA
EECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA