| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is tatC [C]
Identifier: 170077841
GI number: 170077841
Start: 1269330
End: 1270091
Strand: Reverse
Name: tatC [C]
Synonym: SYNPCC7002_A1225
Alternate gene names: 170077841
Gene position: 1270091-1269330 (Counterclockwise)
Preceding gene: 170077842
Following gene: 170077839
Centisome position: 42.22
GC content: 52.1
Gene sequence:
>762_bases ATGACCTCGACCCAAAGTAAAATGCCCCCAACCGAGTCCCCAGATCCCATGCGGGAGATTCCCGATGAAGCAGAAATGTC CTTTTTCGATCACCTCGAAGAACTCCGCTGGCGCATTTTTTATTCGCTGATTTCCGTTGTTGTCGGTTGGGTCGGTTGTT TCTTTTTTGTCAAACCCATCGTCCAGATCTTAGAAGCGCCTGCTGCTGGGGTGAAATTCATCCAGGTGGCCCCCGGCGAA TTTTTCTTTCTCTCGTTTAAGGTGGCGGGCTACACCGGCGCTTTACTGGCGAGTCCTTTTATCCTGTACCAAATTATTCA GTTTGTTTTGCCGGGGCTAACCAGGGGAGAACGGCGTCTCCTCGCTCCCGTTGTCTTGGGGTCTGGTGTGCTGTTTTTTG CGGGCTTGGCCTTTGCCTACGTTGCTTTGATTCCAGCGGCTCTGAATTTTTTCATTACCTATGGTGCTGATGTCGTAGAG GCGGCCTGGTCTATTGAACGGTATTTTGAGTTGGTGCTGGGTCTGATGTTTTTTACGGGGCTAGCGTTTCAGGTGCCTGT GGTGCAAATGATCTTGTCTTGGTTGGGGATTGTTTCTTCGAGCCTGATGCTCAAGGGTTGGCGCTTTGTCGTTCTGGGGG CAGTGGTGCTCGGCGCGGTGATTACGCCCTCGACAGATCCGATGACCCAATCACTCTTGGCTGGGGCCGTCCTGGGCTTA TATTTTGGCGGCATTGGCATTGTGAAACTTTCAGGACGCTAG
Upstream 100 bases:
>100_bases CGAACAATGGCTGCGGGTGCATCAACTGAAAGGGTGATCTCCCCTAACTTCCCCAAAAACCTCCGTTAAAATAAAACTCT GCTGTGCACCTTTCTTCACC
Downstream 100 bases:
>100_bases GGGCTTGGCGATCGCCTGCAGTACAGCGGCCATTAATTCGGGGCGACCAAAGGGTTTACGGAGAAAAGAATCGGGCTGTG GCACAGAATATTCTGGTAAG
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGE FFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVE AAWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL YFGGIGIVKLSGR
Sequences:
>Translated_253_residues MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGE FFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVE AAWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL YFGGIGIVKLSGR >Mature_252_residues TSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGEF FFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEA AWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGLY FGGIGIVKLSGR
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=228, Percent_Identity=32.4561403508772, Blast_Score=120, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 27625; Mature: 27494
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPI CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQILEAPAAGVKFIQVAPGEFFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRL HHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEAAWSIERYFELVLGLMFFTG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YFGGIGIVKLSGR HHCCEEEEEECCC >Mature Secondary Structure TSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPI CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQILEAPAAGVKFIQVAPGEFFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRL HHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEAAWSIERYFELVLGLMFFTG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YFGGIGIVKLSGR HHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]