| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077831
Identifier: 170077831
GI number: 170077831
Start: 1258086
End: 1258694
Strand: Reverse
Name: 170077831
Synonym: SYNPCC7002_A1215
Alternate gene names: NA
Gene position: 1258694-1258086 (Counterclockwise)
Preceding gene: 170077834
Following gene: 170077828
Centisome position: 41.84
GC content: 56.32
Gene sequence:
>609_bases ATGGCAAAGAAAGAATATTTTTTATATGGTGGTTTGTTCCTGGCTGGGGCAATTTTGACGCCAGCGGCAGTTGGTTTATT CGGTCAAGGCGATCGCCCCGCTGAAACAACGGAAACAGCCGCTAATGAAACCTTTGGCAATGGCGACTCCGAGCCAAGTT TTATGGCCGACGAACCCACTACGGCCACCTTTGCCGAAAACGACAGCCGCGAACAGATCCTCAAAGATTACGAAACGGTC TCCCCCGAAGCACTCCGCAACATTCCGACGGCGATTCCCCAGTACGCCACCAACCAGCCTTCCGTGCCGCCCTATCCCAA CTATTGGGCGAATATCAGAATTCCAAACTTCGCCAGTCCGCCCCTCAACCCCAATCCCAGTGCGGGTCAACCCAGTGGGC AAACAGCAGGCGATCGCCCCCCTAACAATGTCGCCAGCGTACCGACCCTCGATTCGCAAACACCCCCAGACGCTTTTCAG CCTGACCCAGCAACGTCCGCCCAGGAGAATCCTAATTTCCAGGGCCAAGACACGATCCAAGCCCCAAGCTCTGTCAATCT CCGGGATTTTGTGAACTCCGCTCCGGCCCGGGAGCTTACGCCGCCCTAG
Upstream 100 bases:
>100_bases ACGGCGATCGCCTAGGATGTTAATCGGCAAATTTGGCGCGACACCGAAACACGGAACAATGTGCTAGAAGGAAGATGAGT TCGCACTATATCTGAACAAG
Downstream 100 bases:
>100_bases CTTGCAGAAAATCACGCACAATTTGCAAGATTTGCGCGGAACTGGTGCCATCCCCAAAGGGATTTACCGCATTGGCCATT TGCTCATACTTTTCCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MAKKEYFLYGGLFLAGAILTPAAVGLFGQGDRPAETTETAANETFGNGDSEPSFMADEPTTATFAENDSREQILKDYETV SPEALRNIPTAIPQYATNQPSVPPYPNYWANIRIPNFASPPLNPNPSAGQPSGQTAGDRPPNNVASVPTLDSQTPPDAFQ PDPATSAQENPNFQGQDTIQAPSSVNLRDFVNSAPARELTPP
Sequences:
>Translated_202_residues MAKKEYFLYGGLFLAGAILTPAAVGLFGQGDRPAETTETAANETFGNGDSEPSFMADEPTTATFAENDSREQILKDYETV SPEALRNIPTAIPQYATNQPSVPPYPNYWANIRIPNFASPPLNPNPSAGQPSGQTAGDRPPNNVASVPTLDSQTPPDAFQ PDPATSAQENPNFQGQDTIQAPSSVNLRDFVNSAPARELTPP >Mature_201_residues AKKEYFLYGGLFLAGAILTPAAVGLFGQGDRPAETTETAANETFGNGDSEPSFMADEPTTATFAENDSREQILKDYETVS PEALRNIPTAIPQYATNQPSVPPYPNYWANIRIPNFASPPLNPNPSAGQPSGQTAGDRPPNNVASVPTLDSQTPPDAFQP DPATSAQENPNFQGQDTIQAPSSVNLRDFVNSAPARELTPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21521; Mature: 21389
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKEYFLYGGLFLAGAILTPAAVGLFGQGDRPAETTETAANETFGNGDSEPSFMADEPT CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCC TATFAENDSREQILKDYETVSPEALRNIPTAIPQYATNQPSVPPYPNYWANIRIPNFASP CEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC PLNPNPSAGQPSGQTAGDRPPNNVASVPTLDSQTPPDAFQPDPATSAQENPNFQGQDTIQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APSSVNLRDFVNSAPARELTPP CCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure AKKEYFLYGGLFLAGAILTPAAVGLFGQGDRPAETTETAANETFGNGDSEPSFMADEPT CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCC TATFAENDSREQILKDYETVSPEALRNIPTAIPQYATNQPSVPPYPNYWANIRIPNFASP CEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC PLNPNPSAGQPSGQTAGDRPPNNVASVPTLDSQTPPDAFQPDPATSAQENPNFQGQDTIQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APSSVNLRDFVNSAPARELTPP CCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA