Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077829

Identifier: 170077829

GI number: 170077829

Start: 1256462

End: 1256833

Strand: Direct

Name: 170077829

Synonym: SYNPCC7002_A1213

Alternate gene names: NA

Gene position: 1256462-1256833 (Clockwise)

Preceding gene: 170077826

Following gene: 170077830

Centisome position: 41.77

GC content: 47.31

Gene sequence:

>372_bases
ATGGACTACTCATCGACGCGCAGTTGGGATTCAGCTTACCTATCTGTACTATTAAAAAGCTTTTTGATCTGGAGTTTTAC
GCTACTGGTTTGCCTTTTGGTTGTCGGTTTTCCAATCGTTGTTTTAATGATGACTATTGGTTCGCTCATGGCCATTGTGC
TCCAGTCTATTTTGCCGGTTAGTGCAGTGCTCGTTGTTGCCGGGACGATTATTGGCGGCACCTTGATGGGCATTTTGGTC
GCAGCGGCAATGCTAACCGCCAAGGGAGTTCACCCGCAAGAGGTGACTTGGTTAACTTGGCTCCATGGAAATGCAGAGGT
CGCATCGGATTCTATTTTTGCAGCCTGCCCTTTAACCTGTGAAGTTAGTTAG

Upstream 100 bases:

>100_bases
TTTATACTATTTACTATCGAAGGGCATCAACACCCAGAAATATTGATGCTTCCATTTAAGTTTTTTGACAACTAAACATA
TCCCTGGGAGGGGACAGATT

Downstream 100 bases:

>100_bases
AGGCACACCTGTACACTGCCTCGTTGATTAGAGTTTTCCAAAGTTCATAGTGATCTAAAAAAAGATGCTTGTATCTACCC
GGTAATTTGCCGGGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV
AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS

Sequences:

>Translated_123_residues
MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV
AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS
>Mature_123_residues
MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV
AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13059; Mature: 13059

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLVVAGTIIGGTLMGILVAAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCHHHCCCCCEECCCEE
EVS
ECC
>Mature Secondary Structure
MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLVVAGTIIGGTLMGILVAAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCHHHCCCCCEECCCEE
EVS
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA