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The map label for this gene is yhdP [H]

Identifier: 170077826

GI number: 170077826

Start: 1252731

End: 1254170

Strand: Direct

Name: yhdP [H]

Synonym: SYNPCC7002_A1210

Alternate gene names: 170077826

Gene position: 1252731-1254170 (Clockwise)

Preceding gene: 170077825

Following gene: 170077829

Centisome position: 41.65

GC content: 49.79

Gene sequence:

>1440_bases
ATGTTATCGAGCGGTGAAATTTTAGTCCGATTATTGTCTGTGTTGTTGCTGATCGCAATTAATGCTTTTTTTGTGACCGC
AGAATTTTCGATTGTCTCGGTGCGGCGATCGCGCATTAGTCAACTAATTGCGGAGGGGGATCTCCAGGCCAAGATGGTGC
AAGCCCTCCAGTCCCGCTTGGAACGCCTCCTCTCGACGACCCAGTTGGGGATTACCCTCTCTAGTTTGGCCCTGGGCTGG
ATTGGTGAAGATACCATGGCGACGGTTATTGCTCAATTTTTGGTGGGATTGCCTCTCCCCGACGACTGGATTCAACCCTT
TGCTGTTTCTATTTCGATCCCTTTTGCTTTTTTCTTAATTGCTTATTTACAGATCGTCTTGGGGGAACTCTGTCCTAAAT
CCTTGGCTCTCTCCCATGCCGAAGAAATGGCCCGCTGGTTGGCCCCTCCCAGTTTGGCGATCGCCCGAATTTTTAAACCG
TTTATTTGGATCTTGAATCAATCTAACCGTCTCCTGTTGCGCCTTGGGGGCATTGCGCCGATTCAGCAGGGGCTTTGGTA
TGACCGACTGACACCAGAAGAACTCCAACTGATTATCACCACCGAACAAGAATCCATGGGCCTAGAGGCGGAGGAACGGG
AGCTTTTAAGTAATGTCATTGAATTTGGTGATGTGGTTGCCGAAGAAATTATGACGCCCCGCACCAAAATCCATGCGATC
GCCAACGGCGCGACCCTCGGCAAACTGTTGCAAAAAGTCAGCCAGACCAATCACTCCGCCTATCCTGTTTATGGAGAATC
CATCGATGACATTGTCGGTTTTGTGCGCTTCCGGGATTTTGCCAAACCCCTAGCCGCCGGGGGGATGAATCTCAATACGG
CCATTAATCGCTGGGTAAAGCCTATTCCCTTCGTCGCCGAGGGTACCCCGATCGCCGACCTCTTGCCGAAAATGCAGCGC
ACCAAACAACCGATGGTCATGGTAGTAGACGAATTTGGGGGTACCGCCGGGCTTGTCACCCTCAAAGATATTATTAATGA
AATTATTGGCGATGAACTCGACAGTCATCCCAATGCGCCACTCCATTTCAAAGCTTTAGATCGACAGACTTTCCTGGTCG
ATGCCCAAATTGATCTCGAAGAACTCAATGATTTGCTAAATGTTGAATTGCCCTACACCGACGATTATCAAACCCTCAGT
GGCTTTTTGCTCTACCAATGGCAAAAAATCCCAGAAACGGGTGAAGTCTTTCACTTTGAAGACCTGAAATTTCAAGTGAT
GGGTATTGATGGCCCCCGCCTCCAACAGGTCAAGATCACCCGCGACCCCTCTGACATTGAGGCGATCGCCGAATTTGATT
TTCCTCCAGAGCCAGAGGATCATCCAGACATGGAAGAAATCCTTGGCCCGGACTTTAAACCCAGCGGCGGAACCGACTAA

Upstream 100 bases:

>100_bases
TCAGGACTATCCAGACCGGGAAATTTCCCTAGAACTTTCTCAGATTCCAGTGATACGTTAGGTAGAAACAGTACGCCTGC
AAGGGTTATAGCACAATTCC

Downstream 100 bases:

>100_bases
GACTGATCCTGGGACTCTTTTTTCTGCAAATCTGGAATCAGATCCGGGCGTTTGGCATCTTCCCAACCCGAAGGCCGCTT
GGAATTAAAAAAGGCGATCA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MLSSGEILVRLLSVLLLIAINAFFVTAEFSIVSVRRSRISQLIAEGDLQAKMVQALQSRLERLLSTTQLGITLSSLALGW
IGEDTMATVIAQFLVGLPLPDDWIQPFAVSISIPFAFFLIAYLQIVLGELCPKSLALSHAEEMARWLAPPSLAIARIFKP
FIWILNQSNRLLLRLGGIAPIQQGLWYDRLTPEELQLIITTEQESMGLEAEERELLSNVIEFGDVVAEEIMTPRTKIHAI
ANGATLGKLLQKVSQTNHSAYPVYGESIDDIVGFVRFRDFAKPLAAGGMNLNTAINRWVKPIPFVAEGTPIADLLPKMQR
TKQPMVMVVDEFGGTAGLVTLKDIINEIIGDELDSHPNAPLHFKALDRQTFLVDAQIDLEELNDLLNVELPYTDDYQTLS
GFLLYQWQKIPETGEVFHFEDLKFQVMGIDGPRLQQVKITRDPSDIEAIAEFDFPPEPEDHPDMEEILGPDFKPSGGTD

Sequences:

>Translated_479_residues
MLSSGEILVRLLSVLLLIAINAFFVTAEFSIVSVRRSRISQLIAEGDLQAKMVQALQSRLERLLSTTQLGITLSSLALGW
IGEDTMATVIAQFLVGLPLPDDWIQPFAVSISIPFAFFLIAYLQIVLGELCPKSLALSHAEEMARWLAPPSLAIARIFKP
FIWILNQSNRLLLRLGGIAPIQQGLWYDRLTPEELQLIITTEQESMGLEAEERELLSNVIEFGDVVAEEIMTPRTKIHAI
ANGATLGKLLQKVSQTNHSAYPVYGESIDDIVGFVRFRDFAKPLAAGGMNLNTAINRWVKPIPFVAEGTPIADLLPKMQR
TKQPMVMVVDEFGGTAGLVTLKDIINEIIGDELDSHPNAPLHFKALDRQTFLVDAQIDLEELNDLLNVELPYTDDYQTLS
GFLLYQWQKIPETGEVFHFEDLKFQVMGIDGPRLQQVKITRDPSDIEAIAEFDFPPEPEDHPDMEEILGPDFKPSGGTD
>Mature_479_residues
MLSSGEILVRLLSVLLLIAINAFFVTAEFSIVSVRRSRISQLIAEGDLQAKMVQALQSRLERLLSTTQLGITLSSLALGW
IGEDTMATVIAQFLVGLPLPDDWIQPFAVSISIPFAFFLIAYLQIVLGELCPKSLALSHAEEMARWLAPPSLAIARIFKP
FIWILNQSNRLLLRLGGIAPIQQGLWYDRLTPEELQLIITTEQESMGLEAEERELLSNVIEFGDVVAEEIMTPRTKIHAI
ANGATLGKLLQKVSQTNHSAYPVYGESIDDIVGFVRFRDFAKPLAAGGMNLNTAINRWVKPIPFVAEGTPIADLLPKMQR
TKQPMVMVVDEFGGTAGLVTLKDIINEIIGDELDSHPNAPLHFKALDRQTFLVDAQIDLEELNDLLNVELPYTDDYQTLS
GFLLYQWQKIPETGEVFHFEDLKFQVMGIDGPRLQQVKITRDPSDIEAIAEFDFPPEPEDHPDMEEILGPDFKPSGGTD

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=394, Percent_Identity=32.741116751269, Blast_Score=241, Evalue=9e-64,
Organism=Escherichia coli, GI145693175, Length=424, Percent_Identity=25.7075471698113, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1790664, Length=466, Percent_Identity=22.7467811158798, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1786879, Length=248, Percent_Identity=24.5967741935484, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788119, Length=233, Percent_Identity=27.0386266094421, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082033, Length=237, Percent_Identity=25.3164556962025, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 53344; Mature: 53344

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSGEILVRLLSVLLLIAINAFFVTAEFSIVSVRRSRISQLIAEGDLQAKMVQALQSRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ERLLSTTQLGITLSSLALGWIGEDTMATVIAQFLVGLPLPDDWIQPFAVSISIPFAFFLI
HHHHHHHHHCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEEEHHHHHHHH
AYLQIVLGELCPKSLALSHAEEMARWLAPPSLAIARIFKPFIWILNQSNRLLLRLGGIAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
IQQGLWYDRLTPEELQLIITTEQESMGLEAEERELLSNVIEFGDVVAEEIMTPRTKIHAI
HHHCCCCCCCCHHHEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ANGATLGKLLQKVSQTNHSAYPVYGESIDDIVGFVRFRDFAKPLAAGGMNLNTAINRWVK
HCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PIPFVAEGTPIADLLPKMQRTKQPMVMVVDEFGGTAGLVTLKDIINEIIGDELDSHPNAP
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCCC
LHFKALDRQTFLVDAQIDLEELNDLLNVELPYTDDYQTLSGFLLYQWQKIPETGEVFHFE
EEEEEECCEEEEEECCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
DLKFQVMGIDGPRLQQVKITRDPSDIEAIAEFDFPPEPEDHPDMEEILGPDFKPSGGTD
CCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLSSGEILVRLLSVLLLIAINAFFVTAEFSIVSVRRSRISQLIAEGDLQAKMVQALQSRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ERLLSTTQLGITLSSLALGWIGEDTMATVIAQFLVGLPLPDDWIQPFAVSISIPFAFFLI
HHHHHHHHHCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCEEEEEEHHHHHHHH
AYLQIVLGELCPKSLALSHAEEMARWLAPPSLAIARIFKPFIWILNQSNRLLLRLGGIAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
IQQGLWYDRLTPEELQLIITTEQESMGLEAEERELLSNVIEFGDVVAEEIMTPRTKIHAI
HHHCCCCCCCCHHHEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ANGATLGKLLQKVSQTNHSAYPVYGESIDDIVGFVRFRDFAKPLAAGGMNLNTAINRWVK
HCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PIPFVAEGTPIADLLPKMQRTKQPMVMVVDEFGGTAGLVTLKDIINEIIGDELDSHPNAP
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCCC
LHFKALDRQTFLVDAQIDLEELNDLLNVELPYTDDYQTLSGFLLYQWQKIPETGEVFHFE
EEEEEECCEEEEEECCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
DLKFQVMGIDGPRLQQVKITRDPSDIEAIAEFDFPPEPEDHPDMEEILGPDFKPSGGTD
CCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]