| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077825
Identifier: 170077825
GI number: 170077825
Start: 1251999
End: 1252691
Strand: Direct
Name: 170077825
Synonym: SYNPCC7002_A1209
Alternate gene names: NA
Gene position: 1251999-1252691 (Clockwise)
Preceding gene: 170077824
Following gene: 170077826
Centisome position: 41.62
GC content: 48.05
Gene sequence:
>693_bases ATGAAGTTTCAAACGACCCTGGCTTTTACTTTCTTGCTCCTGCTTGCAATGTTTGGTGCTGGAACGGTGAGTGCCCTCTA TGGCTTTACAGTGGGTTACGAAGCCCTAAAAGGTGTCAAGCAGCCCGAAGGAAATCCGAGTCAGCAACTGATTCGTAGCC GTCAGCCAGACAATAGCGAAGCAGATCCCGCCGAAAATTTAGAATTTGTGTCCGAGCGATCAATTATTGTGTCTGTTTAC GATCAGATCCAGGCCCAAGAAAAGGAACTCCAAAAGGCCACCCCGGCAGCAACACCGCAAAAGGACGCCTTTATTGAGGA ACAACCTGCGGAAACCGCCGACCAAAAAACCTTTCCCCTCAGCACCAGTGCAGACGATGTCACTTTAGAAATTGTAAGCG GCCAACTTTCTGGTAACGATTGGCTCATGGAAGTAAACCTGCAAAATAATGGCCAGGAAGCGGTGAATTTTTTGTATAAC TTCCTTGAAATTAAAACCGAAACGGGACGATTGTTAAGTACCCAAATGGACGGTCTCCCCAACGAAATCCCTGCAAATCG GCAAAAGTATGCTGGCACCATCCGGATTCCGGCAGTGATCCTGGATGAGACGCAAACCCTGTCGCTCCAACTTCAGGACT ATCCAGACCGGGAAATTTCCCTAGAACTTTCTCAGATTCCAGTGATACGTTAG
Upstream 100 bases:
>100_bases CCGCTCGGCCAACCCTGGCAAATTTGTTGGGGCGATTTTGCCCACAGGCTATCATAGTACAATTTCTTCTCTTCCTTAAC TGTTCCCTCGGCGATCGCCC
Downstream 100 bases:
>100_bases GTAGAAACAGTACGCCTGCAAGGGTTATAGCACAATTCCATGTTATCGAGCGGTGAAATTTTAGTCCGATTATTGTCTGT GTTGTTGCTGATCGCAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKFQTTLAFTFLLLLAMFGAGTVSALYGFTVGYEALKGVKQPEGNPSQQLIRSRQPDNSEADPAENLEFVSERSIIVSVY DQIQAQEKELQKATPAATPQKDAFIEEQPAETADQKTFPLSTSADDVTLEIVSGQLSGNDWLMEVNLQNNGQEAVNFLYN FLEIKTETGRLLSTQMDGLPNEIPANRQKYAGTIRIPAVILDETQTLSLQLQDYPDREISLELSQIPVIR
Sequences:
>Translated_230_residues MKFQTTLAFTFLLLLAMFGAGTVSALYGFTVGYEALKGVKQPEGNPSQQLIRSRQPDNSEADPAENLEFVSERSIIVSVY DQIQAQEKELQKATPAATPQKDAFIEEQPAETADQKTFPLSTSADDVTLEIVSGQLSGNDWLMEVNLQNNGQEAVNFLYN FLEIKTETGRLLSTQMDGLPNEIPANRQKYAGTIRIPAVILDETQTLSLQLQDYPDREISLELSQIPVIR >Mature_230_residues MKFQTTLAFTFLLLLAMFGAGTVSALYGFTVGYEALKGVKQPEGNPSQQLIRSRQPDNSEADPAENLEFVSERSIIVSVY DQIQAQEKELQKATPAATPQKDAFIEEQPAETADQKTFPLSTSADDVTLEIVSGQLSGNDWLMEVNLQNNGQEAVNFLYN FLEIKTETGRLLSTQMDGLPNEIPANRQKYAGTIRIPAVILDETQTLSLQLQDYPDREISLELSQIPVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25531; Mature: 25531
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQTTLAFTFLLLLAMFGAGTVSALYGFTVGYEALKGVKQPEGNPSQQLIRSRQPDNSE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC ADPAENLEFVSERSIIVSVYDQIQAQEKELQKATPAATPQKDAFIEEQPAETADQKTFPL CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC STSADDVTLEIVSGQLSGNDWLMEVNLQNNGQEAVNFLYNFLEIKTETGRLLSTQMDGLP CCCCCCEEEEEEECEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC NEIPANRQKYAGTIRIPAVILDETQTLSLQLQDYPDREISLELSQIPVIR CCCCCCHHHHCCEEEECEEEECCCEEEEEEECCCCCCEEEEEHHCCCCCC >Mature Secondary Structure MKFQTTLAFTFLLLLAMFGAGTVSALYGFTVGYEALKGVKQPEGNPSQQLIRSRQPDNSE CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC ADPAENLEFVSERSIIVSVYDQIQAQEKELQKATPAATPQKDAFIEEQPAETADQKTFPL CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC STSADDVTLEIVSGQLSGNDWLMEVNLQNNGQEAVNFLYNFLEIKTETGRLLSTQMDGLP CCCCCCEEEEEEECEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC NEIPANRQKYAGTIRIPAVILDETQTLSLQLQDYPDREISLELSQIPVIR CCCCCCHHHHCCEEEECEEEECCCEEEEEEECCCCCCEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA