| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pyrE [H]
Identifier: 170077823
GI number: 170077823
Start: 1250621
End: 1251217
Strand: Reverse
Name: pyrE [H]
Synonym: SYNPCC7002_A1206
Alternate gene names: 170077823
Gene position: 1251217-1250621 (Counterclockwise)
Preceding gene: 170077827
Following gene: 170077822
Centisome position: 41.6
GC content: 52.43
Gene sequence:
>597_bases ATGCCTGCCCTTTCTGACCTCCTGACCGCTGATCAAGCCACCCTCAGACAAACACTCCTCAATCAAATCGCCACAGATGC GTATAAAGAAGGCGACTTCACCCTCTCTTCCGGACAAAAAAGCACCTACTATATCAACGGTAAATTGGTCACCCTCACCC CAATGGGAGCGCTCCTCATCGGTCGTCTGATCCTTGCTCAGCTCGATCAAGACGTTGCCGCCGTCGCTGGTTTAACCCTA GGGGCTGACCCGATTGTTAGCGCCGTCAGTGTTGTGTCAGCCTACGAAAATTGTCCCATTCCGGCTCTGATTATTCGCAA AAAAGCAAAGGGCCACGGCACCCAAGCCTATATCGAAGGGCCATCCCTTACCCCAGGCGCGAAAGTGGTTGTCCTTGAAG ATGTTGTGACCACTGGACAGTCCGCCGCCCAAGCCGTTGAGCGTCTCCGGGATGCCGGTTACCAAGTAGAAGAAATTATT GCCCTTGTTGACCGTCAGCAGGGAGGGGCCGAATTTTACGCTAGCCAAAATCTCAAATTTTCTAGCTTGTTTACGATCAC CGAAGTACAAGCCGCCTACCGCGCTTTAAATGCTTAG
Upstream 100 bases:
>100_bases TTTTCATGGCATTACATCCATAAGTCAAATCTTTACCAGCATCTTTGCTCACAAAACCCAATTGGTCAAGTTTTCTCTGT ACTGAACTTCATATACAACC
Downstream 100 bases:
>100_bases TCCCAGACATTGAATCTAATCAAAGTCCTCACTCAATCTGGTGGGGACTTTTGGAATTAGCCCCTGCGTAATGTTTGGTA AATGCTCCCTTGGCTAGGTT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPALSDLLTADQATLRQTLLNQIATDAYKEGDFTLSSGQKSTYYINGKLVTLTPMGALLIGRLILAQLDQDVAAVAGLTL GADPIVSAVSVVSAYENCPIPALIIRKKAKGHGTQAYIEGPSLTPGAKVVVLEDVVTTGQSAAQAVERLRDAGYQVEEII ALVDRQQGGAEFYASQNLKFSSLFTITEVQAAYRALNA
Sequences:
>Translated_198_residues MPALSDLLTADQATLRQTLLNQIATDAYKEGDFTLSSGQKSTYYINGKLVTLTPMGALLIGRLILAQLDQDVAAVAGLTL GADPIVSAVSVVSAYENCPIPALIIRKKAKGHGTQAYIEGPSLTPGAKVVVLEDVVTTGQSAAQAVERLRDAGYQVEEII ALVDRQQGGAEFYASQNLKFSSLFTITEVQAAYRALNA >Mature_197_residues PALSDLLTADQATLRQTLLNQIATDAYKEGDFTLSSGQKSTYYINGKLVTLTPMGALLIGRLILAQLDQDVAAVAGLTLG ADPIVSAVSVVSAYENCPIPALIIRKKAKGHGTQAYIEGPSLTPGAKVVVLEDVVTTGQSAAQAVERLRDAGYQVEEIIA LVDRQQGGAEFYASQNLKFSSLFTITEVQAAYRALNA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=169, Percent_Identity=32.5443786982249, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17508631, Length=174, Percent_Identity=32.7586206896552, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17554964, Length=192, Percent_Identity=31.7708333333333, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17933654, Length=176, Percent_Identity=30.6818181818182, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 20958; Mature: 20827
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALSDLLTADQATLRQTLLNQIATDAYKEGDFTLSSGQKSTYYINGKLVTLTPMGALLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEEECCHHHHHH GRLILAQLDQDVAAVAGLTLGADPIVSAVSVVSAYENCPIPALIIRKKAKGHGTQAYIEG HHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCEEEEEC PSLTPGAKVVVLEDVVTTGQSAAQAVERLRDAGYQVEEIIALVDRQQGGAEFYASQNLKF CCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCH SSLFTITEVQAAYRALNA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PALSDLLTADQATLRQTLLNQIATDAYKEGDFTLSSGQKSTYYINGKLVTLTPMGALLI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEEECCHHHHHH GRLILAQLDQDVAAVAGLTLGADPIVSAVSVVSAYENCPIPALIIRKKAKGHGTQAYIEG HHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCEEEEEC PSLTPGAKVVVLEDVVTTGQSAAQAVERLRDAGYQVEEIIALVDRQQGGAEFYASQNLKF CCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCH SSLFTITEVQAAYRALNA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]