| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077827
Identifier: 170077827
GI number: 170077827
Start: 1254167
End: 1254376
Strand: Reverse
Name: 170077827
Synonym: SYNPCC7002_A1211
Alternate gene names: NA
Gene position: 1254376-1254167 (Counterclockwise)
Preceding gene: 170077828
Following gene: 170077823
Centisome position: 41.7
GC content: 49.52
Gene sequence:
>210_bases ATGTCCGATTCTCATTCTCTATTTTTGGCAGTTGCTGGCCAACCCTTCCCTTTATACTTCACCCTCGTTTACGTGGTGGG CTTCGTGGCGGCGGTATCCATTGGTCTGATCGCCTTTTTTAATTCCAAGCGGCCTTCGGGTTGGGAAGATGCCAAACGCC CGGATCTGATTCCAGATTTGCAGAAAAAAGAGTCCCAGGATCAGTCTTAG
Upstream 100 bases:
>100_bases CGCCGACGCCCAACGAAATGGCGATGATGCTCCGGGGACGGATCTAGGCAGAGACCCGTTTCTTGGTAAGCTTGTAACGA ATTGTAACGATCAAGAAGTT
Downstream 100 bases:
>100_bases TCGGTTCCGCCGCTGGGTTTAAAGTCCGGGCCAAGGATTTCTTCCATGTCTGGATGATCCTCTGGCTCTGGAGGAAAATC AAATTCGGCGATCGCCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSDSHSLFLAVAGQPFPLYFTLVYVVGFVAAVSIGLIAFFNSKRPSGWEDAKRPDLIPDLQKKESQDQS
Sequences:
>Translated_69_residues MSDSHSLFLAVAGQPFPLYFTLVYVVGFVAAVSIGLIAFFNSKRPSGWEDAKRPDLIPDLQKKESQDQS >Mature_68_residues SDSHSLFLAVAGQPFPLYFTLVYVVGFVAAVSIGLIAFFNSKRPSGWEDAKRPDLIPDLQKKESQDQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7632; Mature: 7501
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSHSLFLAVAGQPFPLYFTLVYVVGFVAAVSIGLIAFFNSKRPSGWEDAKRPDLIPDL CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QKKESQDQS HHCCCCCCC >Mature Secondary Structure SDSHSLFLAVAGQPFPLYFTLVYVVGFVAAVSIGLIAFFNSKRPSGWEDAKRPDLIPDL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QKKESQDQS HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA