BacMap

Definition	Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession	NC_010475
Length	3,008,047

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The map label for this gene is hflB [C]

Identifier: 170077798

GI number: 170077798

Start: 1222339

End: 1223838

Strand: Reverse

Name: hflB [C]

Synonym: SYNPCC7002_A1181

Alternate gene names: 170077798

Gene position: 1223838-1222339 (Counterclockwise)

Preceding gene: 170077799

Following gene: 170077797

Centisome position: 40.69

GC content: 52.0

Gene sequence:

>1500_bases
ATGAAAGAAGAGCTCAATACCCTCATTCAAGCTCAATACCCCCTGATCTACCTCATCACCCCCGAGGAGGAACGGGCCGA
GGCGGCGATCGCCCACATTGCGCAACTGTGTGAATATCAGAATGTTTTCGTCTGGACGATGACCCATGGCTTGGTGGAAT
ATGGTTCCGACCGGAAGCCCCAAACTCGCACCCTCTCAGCAGAAGCGGCCATTCGTGAAGTCATTCACCACAACGATTCT
GGCATTTTTATCTTTGAGGATCTGCATCCATTTTTAGACGATCCCAGCACCGTCCGTTGGTTACGGGATGCGATCGCCAG
CTTTAAGGGCCGCCAAAAGCACATTATTTTAATGTCCCCCTATCAGAAGGTGCCCCTCGAACTCGAAAAAGACGTTGTTG
TCCTGGATTTTCCTTTCCCGACCCTCGACGAACTCGATCAAGTTCTCGCCCAATACCTCAATCCCCGGCACCCCATTTCC
CCCGTTGTGCGAGAAAAACTCCTCAAGGCAGCCCTGGGCCTGACTAAGGACGAAGCCGAGAAAGTTTATCGCAAAGCCCA
GGTTAAGGCGAAGAAACTCACTGCTTCAGAGGTAGAAATTGTCCTCTCCGAGAAAAAGCAACTGATTCGCCGTAACGGTA
TTCTCGAATTTATCGAAGAAGACGAAACCATTGACGCCATCGGCGGCTTAGAGGAACTCAAGCGCTGGCTTAAACAACGC
TCCAATGCCTTTACCGAAGCAGCACGGGAATATGGACTACCCCAACCCAAGGGAATGTTGATTCTTGGTGTACCGGGTTG
TGGTAAATCACTCCTGGCTAAAACAACTTCTCGGTTATGGGGTCTTCCCCTCCTGCGTCTCGATATGGGGCGGGTATATG
ATGGCTCCACCGTAGGCAAATCCGAAGCAAACCTCCGCAGTGCCCTTAAAACCGCCGAGTCCATTTCTCCAGCGATTCTC
TTTATCGACGAATTAGACAAAGCCTTTGCCGGTTCCTCTGGATCTGCGGATTCCGATGGAGGCACCTCCAGCCGTATCTT
TGGCTCGTTTCTCACCTGGATGCAAGAAAAAGAATCCCCCGTTTTTGTAATGGCCACCGCGAACCGAGTGGATCGGCTAC
CAGGGGAATTTCTTCGGAAAGGACGATTCGACGAAATCTTTTTCGTGGATCTCCCCAACCCCAGCGAACGGGAAGCGATC
TTTAATATCCATCTCCACAAACGTCGGCCAGTCGGCGATCGCTTCGACACAGAACAACTGGCAAAAATTTCAGAAGGTTT
TTCCGGTGCGGAAATCGAACAGGCGATTATTGCCGCCATGTACGAGGCCTTTGCCCAAGATCGCGAGTTTACCCAACTCG
ACATTATCGCCGCGATCAAAGCAACCTTGCCCCTTTCCCGCACCATGACTGAACAGGTCAATAGTCTCCGCGATTGGGCC
AGACAGCGCGCCCGACCTGCTTCAGCCTCCGTCGCCGAATACCAGCGATTGGAGTTCTAA

Upstream 100 bases:

>100_bases
TCCGATCGGCGATCGCCGTTTATTTTTCTCCCGATTTACCTCCACTCTGGTCGATGTGGTGCCGCCTAATTCCCCCTTTT
AGAACGTCAGGACTAAACCC

Downstream 100 bases:

>100_bases
CAGGCTTAATCTGTCCCGGATTAAGGTCAACAAGATTCCCAACTTGTTGGCATTTAAAAAACCACTTTATTAGTGGTCTT
TACACAAAAAACTCAAATGT

Product: ABC transporter ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKEELNTLIQAQYPLIYLITPEEERAEAAIAHIAQLCEYQNVFVWTMTHGLVEYGSDRKPQTRTLSAEAAIREVIHHNDS
GIFIFEDLHPFLDDPSTVRWLRDAIASFKGRQKHIILMSPYQKVPLELEKDVVVLDFPFPTLDELDQVLAQYLNPRHPIS
PVVREKLLKAALGLTKDEAEKVYRKAQVKAKKLTASEVEIVLSEKKQLIRRNGILEFIEEDETIDAIGGLEELKRWLKQR
SNAFTEAAREYGLPQPKGMLILGVPGCGKSLLAKTTSRLWGLPLLRLDMGRVYDGSTVGKSEANLRSALKTAESISPAIL
FIDELDKAFAGSSGSADSDGGTSSRIFGSFLTWMQEKESPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNPSEREAI
FNIHLHKRRPVGDRFDTEQLAKISEGFSGAEIEQAIIAAMYEAFAQDREFTQLDIIAAIKATLPLSRTMTEQVNSLRDWA
RQRARPASASVAEYQRLEF

Sequences:

>Translated_499_residues
MKEELNTLIQAQYPLIYLITPEEERAEAAIAHIAQLCEYQNVFVWTMTHGLVEYGSDRKPQTRTLSAEAAIREVIHHNDS
GIFIFEDLHPFLDDPSTVRWLRDAIASFKGRQKHIILMSPYQKVPLELEKDVVVLDFPFPTLDELDQVLAQYLNPRHPIS
PVVREKLLKAALGLTKDEAEKVYRKAQVKAKKLTASEVEIVLSEKKQLIRRNGILEFIEEDETIDAIGGLEELKRWLKQR
SNAFTEAAREYGLPQPKGMLILGVPGCGKSLLAKTTSRLWGLPLLRLDMGRVYDGSTVGKSEANLRSALKTAESISPAIL
FIDELDKAFAGSSGSADSDGGTSSRIFGSFLTWMQEKESPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNPSEREAI
FNIHLHKRRPVGDRFDTEQLAKISEGFSGAEIEQAIIAAMYEAFAQDREFTQLDIIAAIKATLPLSRTMTEQVNSLRDWA
RQRARPASASVAEYQRLEF
>Mature_499_residues
MKEELNTLIQAQYPLIYLITPEEERAEAAIAHIAQLCEYQNVFVWTMTHGLVEYGSDRKPQTRTLSAEAAIREVIHHNDS
GIFIFEDLHPFLDDPSTVRWLRDAIASFKGRQKHIILMSPYQKVPLELEKDVVVLDFPFPTLDELDQVLAQYLNPRHPIS
PVVREKLLKAALGLTKDEAEKVYRKAQVKAKKLTASEVEIVLSEKKQLIRRNGILEFIEEDETIDAIGGLEELKRWLKQR
SNAFTEAAREYGLPQPKGMLILGVPGCGKSLLAKTTSRLWGLPLLRLDMGRVYDGSTVGKSEANLRSALKTAESISPAIL
FIDELDKAFAGSSGSADSDGGTSSRIFGSFLTWMQEKESPVFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNPSEREAI
FNIHLHKRRPVGDRFDTEQLAKISEGFSGAEIEQAIIAAMYEAFAQDREFTQLDIIAAIKATLPLSRTMTEQVNSLRDWA
RQRARPASASVAEYQRLEF

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=239, Percent_Identity=34.3096234309623, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI6005942, Length=217, Percent_Identity=34.5622119815668, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI4507173, Length=214, Percent_Identity=33.1775700934579, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI45643125, Length=294, Percent_Identity=28.2312925170068, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI45643123, Length=235, Percent_Identity=30.6382978723404, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI195539395, Length=246, Percent_Identity=31.7073170731707, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4505725, Length=225, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI300192933, Length=243, Percent_Identity=32.0987654320988, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI229577436, Length=374, Percent_Identity=25.4010695187166, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI21361144, Length=201, Percent_Identity=30.8457711442786, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI24430151, Length=235, Percent_Identity=28.5106382978723, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI24497435, Length=252, Percent_Identity=28.1746031746032, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI310125280, Length=212, Percent_Identity=28.7735849056604, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI31377644, Length=264, Percent_Identity=27.6515151515151, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI89064750, Length=215, Percent_Identity=28.3720930232558, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI5729991, Length=215, Percent_Identity=28.3720930232558, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI24497618, Length=249, Percent_Identity=28.9156626506024, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI310125282, Length=212, Percent_Identity=28.7735849056604, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI24430155, Length=215, Percent_Identity=28.3720930232558, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI156564401, Length=212, Percent_Identity=28.7735849056604, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI7657689, Length=236, Percent_Identity=27.9661016949153, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI21327685, Length=236, Percent_Identity=27.9661016949153, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI153792536, Length=236, Percent_Identity=30.0847457627119, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI194018488, Length=129, Percent_Identity=37.2093023255814, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI4506209, Length=253, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI31742536, Length=210, Percent_Identity=28.0952380952381, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI112789543, Length=210, Percent_Identity=28.0952380952381, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI17865802, Length=179, Percent_Identity=29.0502793296089, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1789568, Length=239, Percent_Identity=30.5439330543933, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17532375, Length=213, Percent_Identity=33.8028169014084, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508053, Length=248, Percent_Identity=31.8548387096774, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI25153574, Length=225, Percent_Identity=30.2222222222222, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17531535, Length=214, Percent_Identity=34.1121495327103, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17537217, Length=229, Percent_Identity=31.0043668122271, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI193209502, Length=224, Percent_Identity=29.9107142857143, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71994521, Length=226, Percent_Identity=34.9557522123894, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17554264, Length=190, Percent_Identity=34.7368421052632, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71987372, Length=235, Percent_Identity=31.4893617021277, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71987364, Length=235, Percent_Identity=31.4893617021277, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17541224, Length=222, Percent_Identity=29.7297297297297, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17541226, Length=222, Percent_Identity=29.7297297297297, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17562804, Length=228, Percent_Identity=31.140350877193, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17563250, Length=235, Percent_Identity=28.0851063829787, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508701, Length=222, Percent_Identity=29.2792792792793, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115534323, Length=229, Percent_Identity=30.5676855895196, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17554784, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25144278, Length=248, Percent_Identity=29.8387096774194, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25144281, Length=248, Percent_Identity=29.8387096774194, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17554786, Length=250, Percent_Identity=29.6, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17505546, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193206114, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193206116, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133931034, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=236, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=236, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17563248, Length=218, Percent_Identity=26.605504587156, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320077, Length=215, Percent_Identity=33.4883720930233, Blast_Score=113, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6323736, Length=225, Percent_Identity=34.6666666666667, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323429, Length=257, Percent_Identity=30.3501945525292, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324833, Length=243, Percent_Identity=34.156378600823, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6322994, Length=194, Percent_Identity=29.8969072164948, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322651, Length=200, Percent_Identity=31, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6320854, Length=235, Percent_Identity=29.3617021276596, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321465, Length=204, Percent_Identity=28.4313725490196, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325281, Length=222, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324691, Length=230, Percent_Identity=29.5652173913043, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6324000, Length=199, Percent_Identity=28.1407035175879, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6319554, Length=233, Percent_Identity=29.1845493562232, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320197, Length=235, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6321390, Length=247, Percent_Identity=26.7206477732794, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6320602, Length=238, Percent_Identity=28.1512605042017, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321709, Length=238, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320887, Length=250, Percent_Identity=28.4, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322704, Length=217, Percent_Identity=26.7281105990783, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325431, Length=188, Percent_Identity=27.6595744680851, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI161076486, Length=278, Percent_Identity=30.2158273381295, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI161076488, Length=278, Percent_Identity=30.2158273381295, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI17137560, Length=278, Percent_Identity=30.2158273381295, Blast_Score=119, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24660075, Length=219, Percent_Identity=33.7899543378995, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281365776, Length=219, Percent_Identity=33.7899543378995, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45552965, Length=222, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19921202, Length=270, Percent_Identity=30.7407407407407, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24652279, Length=228, Percent_Identity=32.4561403508772, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24639391, Length=227, Percent_Identity=32.5991189427313, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24656825, Length=244, Percent_Identity=29.5081967213115, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24656820, Length=244, Percent_Identity=29.5081967213115, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24665814, Length=226, Percent_Identity=32.3008849557522, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281363136, Length=223, Percent_Identity=31.390134529148, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI78707192, Length=223, Percent_Identity=31.390134529148, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24658770, Length=229, Percent_Identity=30.1310043668122, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28574878, Length=226, Percent_Identity=32.3008849557522, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24640100, Length=251, Percent_Identity=31.0756972111554, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17864540, Length=236, Percent_Identity=28.8135593220339, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361487, Length=231, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24663015, Length=220, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573010, Length=236, Percent_Identity=28.3898305084746, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI18860063, Length=231, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI20129423, Length=182, Percent_Identity=31.3186813186813, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI19920408, Length=252, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17738151, Length=207, Percent_Identity=29.4685990338164, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649446, Length=235, Percent_Identity=28.0851063829787, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129529, Length=191, Percent_Identity=30.8900523560209, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355121, Length=227, Percent_Identity=29.0748898678414, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24651451, Length=254, Percent_Identity=27.5590551181102, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17137738, Length=253, Percent_Identity=26.8774703557312, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI18859657, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571849, Length=190, Percent_Identity=32.1052631578947, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571847, Length=190, Percent_Identity=32.1052631578947, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581396, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24639486, Length=191, Percent_Identity=30.8900523560209, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281360136, Length=271, Percent_Identity=25.830258302583, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644411, Length=271, Percent_Identity=25.830258302583, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360144, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360140, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360146, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360138, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360142, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21357333, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24644145, Length=191, Percent_Identity=30.3664921465969, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56292; Mature: 56292

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEELNTLIQAQYPLIYLITPEEERAEAAIAHIAQLCEYQNVFVWTMTHGLVEYGSDRKP
CCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCC
QTRTLSAEAAIREVIHHNDSGIFIFEDLHPFLDDPSTVRWLRDAIASFKGRQKHIILMSP
CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
YQKVPLELEKDVVVLDFPFPTLDELDQVLAQYLNPRHPISPVVREKLLKAALGLTKDEAE
CCCCCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH
KVYRKAQVKAKKLTASEVEIVLSEKKQLIRRNGILEFIEEDETIDAIGGLEELKRWLKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCHHHHHHHHHHH
SNAFTEAAREYGLPQPKGMLILGVPGCGKSLLAKTTSRLWGLPLLRLDMGRVYDGSTVGK
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
SEANLRSALKTAESISPAILFIDELDKAFAGSSGSADSDGGTSSRIFGSFLTWMQEKESP
CHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
VFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNPSEREAIFNIHLHKRRPVGDRFDTEQL
EEEEEECCHHHCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHH
AKISEGFSGAEIEQAIIAAMYEAFAQDREFTQLDIIAAIKATLPLSRTMTEQVNSLRDWA
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RQRARPASASVAEYQRLEF
HHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKEELNTLIQAQYPLIYLITPEEERAEAAIAHIAQLCEYQNVFVWTMTHGLVEYGSDRKP
CCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCC
QTRTLSAEAAIREVIHHNDSGIFIFEDLHPFLDDPSTVRWLRDAIASFKGRQKHIILMSP
CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
YQKVPLELEKDVVVLDFPFPTLDELDQVLAQYLNPRHPISPVVREKLLKAALGLTKDEAE
CCCCCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH
KVYRKAQVKAKKLTASEVEIVLSEKKQLIRRNGILEFIEEDETIDAIGGLEELKRWLKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCHHHHHHHHHHH
SNAFTEAAREYGLPQPKGMLILGVPGCGKSLLAKTTSRLWGLPLLRLDMGRVYDGSTVGK
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
SEANLRSALKTAESISPAILFIDELDKAFAGSSGSADSDGGTSSRIFGSFLTWMQEKESP
CHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
VFVMATANRVDRLPGEFLRKGRFDEIFFVDLPNPSEREAIFNIHLHKRRPVGDRFDTEQL
EEEEEECCHHHCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHH
AKISEGFSGAEIEQAIIAAMYEAFAQDREFTQLDIIAAIKATLPLSRTMTEQVNSLRDWA
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RQRARPASASVAEYQRLEF
HHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]