| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077799
Identifier: 170077799
GI number: 170077799
Start: 1223942
End: 1224349
Strand: Reverse
Name: 170077799
Synonym: SYNPCC7002_A1182
Alternate gene names: NA
Gene position: 1224349-1223942 (Counterclockwise)
Preceding gene: 170077801
Following gene: 170077798
Centisome position: 40.7
GC content: 51.72
Gene sequence:
>408_bases TTGACGGTCTCCGGTGGGCTGGGTACAGTAGGGCGGTATACCCCATCGGGTAAAGCTTCCATTAGTTGTATGCAAGATAA GCAAAAAGTCACCCTCTATCTGCCTGCGGCGATCCATCGTCAGCTCAAAATCAAGGCAGCCCTCGATGCAGATTCCATGT CTGCTTTAGTGGAAAAAGCCGTGGCCTTCTATCTACAACACCCTGAAGTGGTAGAAGAAGTACAAGAAACCTATGGCCAA ACCCACCGTGTCCACATTTGTCCCGATTGCGAAGGGGCGGTGGTACTCCGGGATGGACAACTGGTTTCCCTCAAGAGGCA GCCAACGGTACTCCTTGATGAAGAGATTGCACAGGATTTGCAAAGTGCAAAGGGTGCTGCGGATGGGGCAGAACTAGTCA CTTGCTAG
Upstream 100 bases:
>100_bases CAGGGTCTACCCCCAGACAGATGGCAATTTCCTCACAGTGGCAATCGCCTAGATTTTGTAACGGAATATTACAAAAAAGA CGGCATAACGCTATAGCAGC
Downstream 100 bases:
>100_bases CTGTCCGATCGGCGATCGCCGTTTATTTTTCTCCCGATTTACCTCCACTCTGGTCGATGTGGTGCCGCCTAATTCCCCCT TTTAGAACGTCAGGACTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTVSGGLGTVGRYTPSGKASISCMQDKQKVTLYLPAAIHRQLKIKAALDADSMSALVEKAVAFYLQHPEVVEEVQETYGQ THRVHICPDCEGAVVLRDGQLVSLKRQPTVLLDEEIAQDLQSAKGAADGAELVTC
Sequences:
>Translated_135_residues MTVSGGLGTVGRYTPSGKASISCMQDKQKVTLYLPAAIHRQLKIKAALDADSMSALVEKAVAFYLQHPEVVEEVQETYGQ THRVHICPDCEGAVVLRDGQLVSLKRQPTVLLDEEIAQDLQSAKGAADGAELVTC >Mature_134_residues TVSGGLGTVGRYTPSGKASISCMQDKQKVTLYLPAAIHRQLKIKAALDADSMSALVEKAVAFYLQHPEVVEEVQETYGQT HRVHICPDCEGAVVLRDGQLVSLKRQPTVLLDEEIAQDLQSAKGAADGAELVTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14509; Mature: 14378
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSGGLGTVGRYTPSGKASISCMQDKQKVTLYLPAAIHRQLKIKAALDADSMSALVEKA CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHEEEEEECCHHHHHHHHHHH VAFYLQHPEVVEEVQETYGQTHRVHICPDCEGAVVLRDGQLVSLKRQPTVLLDEEIAQDL HHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEECCCCCEEECHHHHHHH QSAKGAADGAELVTC HHHCCCCCCCEEECC >Mature Secondary Structure TVSGGLGTVGRYTPSGKASISCMQDKQKVTLYLPAAIHRQLKIKAALDADSMSALVEKA CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHEEEEEECCHHHHHHHHHHH VAFYLQHPEVVEEVQETYGQTHRVHICPDCEGAVVLRDGQLVSLKRQPTVLLDEEIAQDL HHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEECCCCCEEECHHHHHHH QSAKGAADGAELVTC HHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA