Click here to switch to the map view.

The map label for this gene is 170077795

Identifier: 170077795

GI number: 170077795

Start: 1219560

End: 1220861

Strand: Direct

Name: 170077795

Synonym: SYNPCC7002_A1178

Alternate gene names: NA

Gene position: 1219560-1220861 (Clockwise)

Preceding gene: 170077794

Following gene: 170077800

Centisome position: 40.54

GC content: 53.46

Gene sequence:

>1302_bases
ATGTCTAAAGCTGCCTTATCCGGAAAAATGTTGGCGATCGCCCTTGCAACCCTCAGTAGTGTTGTACCTTTGGGACGCGC
CCAAGCCCAAACTGTTTTTGGAGAAGCAGAGATCAACCCCGAATCCATGGCGGCGATCGCCGTCCCCCTCAGTAACGGTG
GCTATAACCTCCTCGTAGTCGAACAGCTCGAACGGGAAGACCGCAAAGAATGTTGGGCCGAAAGTGGCGCAAATCCGACC
AGCATTGATCCCCTGCTGCTGAACTTTGACTTTACTGGCTATTGTCGCCGCAGCACCGATAGTAATGGCTACTCCATGCG
GATCAATGGGCAAGATTTTGGCCAGAGCCACCTATTGCGCATCACTCGCTTCGAAAATGAAATTTTGTTGGTCGCCACTC
CCAAAGATAACGATCAAGAAGAAATTGTCATTGGCCGTAGTAATGGTCTCACCGAAGGCTTCCTTAAGTTCAACCTCCTC
CCCGGTTGGGAATTTACCCGCCGTACCTTTGAAGAGCGACCCCTGGGCCACTTTTACTTTTCTAACGAGGGCCGCCAGTT
CGCCGTCCTTAAAAAACCCACCATTGATGACTTAGTTGCGGGCATTACGCAGAGTTCAATTGTGACGGTCGATAGTCTCC
CCGGTCTGGCAATCTCCCCACCAGAAATTACAAATCCCTCTGAAACGCCTGATCCCGGCAGTACGGTGGCCCAATTTACT
GATATCAGTGGTGATATTTACCGTAACGAAATTGCCCAAGCGGTGAATGTCGGTTTTATTGCTGGTTTTAACGACAATAC
CTTCCGGCCCACCGATGTCCTGACCCGCGAACAGTTGGTTTCCATGGCCATTGAAGGTCTCCAAGCTCTTCCCAATGCTT
CCCTGGCTGTGCCCACCCAAGTTGCGAATGCCCCCTATCCCGATGTGGCTGCCGACCGTTGGAGTGCGGCAAAAATCACC
TGGGCCCAGGCGAACAATATTGTCAGTGGCTATCCCGATGGGACTTTCCAACCCACTCAACCCGTCACCCGGGCCGAACT
ATTAGCCGTTCTCCGTCGCACCGCAGAATATGCCAAGGCCGCCCAAGGTCAACCGATGACCCTCGTGGCCACCAATGGCC
CCATTGCTTTTAGTGATACGGCGGGTCACTGGGCCAATGATTTGGCTGCCCAGATGTCTACTTACTGTCGCGTCGCTTCT
CCTTTGAATGAAAGTGGCGATCGCTTTTTCCCCGATACTGCCTCCCAACGGAACTACGCCGCCGCTGCCACCCTCCGGAC
ACTCCAATGCAGCGTGCGATAA

Upstream 100 bases:

>100_bases
ATTCGGAAAATATGTAAGACTTTTGTAATAGCTGGGCTCAAAATAGGCGAAATTCAGTCTAATGGGAGCAGTAGTTGTCT
AAAATCCAAGATTATTTGTC

Downstream 100 bases:

>100_bases
ATTTTCCCTTTAAATTTTGGCCATAAAAAGACCATAAAAAAATAGCCCTGGTGTTGATTCATCGGGGCTATTGCTATATC
AGGCTTTTTTTACCAACCGA

Product: S-layer like protein

Products: NA

Alternate protein names: S-layer protein 2 [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSKAALSGKMLAIALATLSSVVPLGRAQAQTVFGEAEINPESMAAIAVPLSNGGYNLLVVEQLEREDRKECWAESGANPT
SIDPLLLNFDFTGYCRRSTDSNGYSMRINGQDFGQSHLLRITRFENEILLVATPKDNDQEEIVIGRSNGLTEGFLKFNLL
PGWEFTRRTFEERPLGHFYFSNEGRQFAVLKKPTIDDLVAGITQSSIVTVDSLPGLAISPPEITNPSETPDPGSTVAQFT
DISGDIYRNEIAQAVNVGFIAGFNDNTFRPTDVLTREQLVSMAIEGLQALPNASLAVPTQVANAPYPDVAADRWSAAKIT
WAQANNIVSGYPDGTFQPTQPVTRAELLAVLRRTAEYAKAAQGQPMTLVATNGPIAFSDTAGHWANDLAAQMSTYCRVAS
PLNESGDRFFPDTASQRNYAAAATLRTLQCSVR

Sequences:

>Translated_433_residues
MSKAALSGKMLAIALATLSSVVPLGRAQAQTVFGEAEINPESMAAIAVPLSNGGYNLLVVEQLEREDRKECWAESGANPT
SIDPLLLNFDFTGYCRRSTDSNGYSMRINGQDFGQSHLLRITRFENEILLVATPKDNDQEEIVIGRSNGLTEGFLKFNLL
PGWEFTRRTFEERPLGHFYFSNEGRQFAVLKKPTIDDLVAGITQSSIVTVDSLPGLAISPPEITNPSETPDPGSTVAQFT
DISGDIYRNEIAQAVNVGFIAGFNDNTFRPTDVLTREQLVSMAIEGLQALPNASLAVPTQVANAPYPDVAADRWSAAKIT
WAQANNIVSGYPDGTFQPTQPVTRAELLAVLRRTAEYAKAAQGQPMTLVATNGPIAFSDTAGHWANDLAAQMSTYCRVAS
PLNESGDRFFPDTASQRNYAAAATLRTLQCSVR
>Mature_432_residues
SKAALSGKMLAIALATLSSVVPLGRAQAQTVFGEAEINPESMAAIAVPLSNGGYNLLVVEQLEREDRKECWAESGANPTS
IDPLLLNFDFTGYCRRSTDSNGYSMRINGQDFGQSHLLRITRFENEILLVATPKDNDQEEIVIGRSNGLTEGFLKFNLLP
GWEFTRRTFEERPLGHFYFSNEGRQFAVLKKPTIDDLVAGITQSSIVTVDSLPGLAISPPEITNPSETPDPGSTVAQFTD
ISGDIYRNEIAQAVNVGFIAGFNDNTFRPTDVLTREQLVSMAIEGLQALPNASLAVPTQVANAPYPDVAADRWSAAKITW
AQANNIVSGYPDGTFQPTQPVTRAELLAVLRRTAEYAKAAQGQPMTLVATNGPIAFSDTAGHWANDLAAQMSTYCRVASP
LNESGDRFFPDTASQRNYAAAATLRTLQCSVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 46933; Mature: 46802

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAALSGKMLAIALATLSSVVPLGRAQAQTVFGEAEINPESMAAIAVPLSNGGYNLLVV
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCEEEEEEEECCCCEEEEEE
EQLEREDRKECWAESGANPTSIDPLLLNFDFTGYCRRSTDSNGYSMRINGQDFGQSHLLR
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEECCCCCCCCCEEE
ITRFENEILLVATPKDNDQEEIVIGRSNGLTEGFLKFNLLPGWEFTRRTFEERPLGHFYF
EEEECCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEE
SNEGRQFAVLKKPTIDDLVAGITQSSIVTVDSLPGLAISPPEITNPSETPDPGSTVAQFT
CCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHC
DISGDIYRNEIAQAVNVGFIAGFNDNTFRPTDVLTREQLVSMAIEGLQALPNASLAVPTQ
CCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHH
VANAPYPDVAADRWSAAKITWAQANNIVSGYPDGTFQPTQPVTRAELLAVLRRTAEYAKA
HCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AQGQPMTLVATNGPIAFSDTAGHWANDLAAQMSTYCRVASPLNESGDRFFPDTASQRNYA
CCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHH
AAATLRTLQCSVR
HHHHEEEEEEECC
>Mature Secondary Structure 
SKAALSGKMLAIALATLSSVVPLGRAQAQTVFGEAEINPESMAAIAVPLSNGGYNLLVV
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCEEEEEEEECCCCEEEEEE
EQLEREDRKECWAESGANPTSIDPLLLNFDFTGYCRRSTDSNGYSMRINGQDFGQSHLLR
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEECCCCCCCCCEEE
ITRFENEILLVATPKDNDQEEIVIGRSNGLTEGFLKFNLLPGWEFTRRTFEERPLGHFYF
EEEECCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEE
SNEGRQFAVLKKPTIDDLVAGITQSSIVTVDSLPGLAISPPEITNPSETPDPGSTVAQFT
CCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHC
DISGDIYRNEIAQAVNVGFIAGFNDNTFRPTDVLTREQLVSMAIEGLQALPNASLAVPTQ
CCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHH
VANAPYPDVAADRWSAAKITWAQANNIVSGYPDGTFQPTQPVTRAELLAVLRRTAEYAKA
HCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AQGQPMTLVATNGPIAFSDTAGHWANDLAAQMSTYCRVASPLNESGDRFFPDTASQRNYA
CCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHH
AAATLRTLQCSVR
HHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]