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The map label for this gene is cmpC [H]

Identifier: 170077788

GI number: 170077788

Start: 1202321

End: 1203652

Strand: Reverse

Name: cmpC [H]

Synonym: SYNPCC7002_A1171

Alternate gene names: 170077788

Gene position: 1203652-1202321 (Counterclockwise)

Preceding gene: 170077789

Following gene: 170077783

Centisome position: 40.01

GC content: 54.35

Gene sequence:

>1332_bases
ATGAAACGCCGCCACCTGCTCAAATACGGAACCTTTGCTGCCTGGGGTTATGGTCTCACTGCTTGCAATCGACTCCCAGA
TACCGTTCGTCTGCCAGGAAGATCTGCGAAGCAAGCTAACTTAGAATCAACTCCGCCGATATTAGATCTGAGTGCCCCGG
AAAAGCAAACCCTCACCCTGGGTTATGTGCCGGACTTGGCGATCGCCCCCTGGCTGATGGCCCTCACCCAAGGCTTTTTT
GAGCAGTATGGCCTGGAAGTTGAGCTGTATCCCCAGGTAGATCAACAGGCCGTGGAGCAGGGGCTACTAGAATCGCGTTT
TGATGCGGCGATTACCTCTTTTTCGACACCACTGATTTATCAGCTCAAAAGTCCTAGGGTTGATCTGGTCGCGTTGATGC
AGATCCATCGCCACGGCGGTGTTTTTTGTGGCTGCCAACAGACCTGGGCTGATAATATTCGTTCTGGCATCGACTATGCG
AATTTTGCAGAATTTGCGGCGGCCTACCGGGACTATGTGCGGGCTTTACCGGAAAAAACCTTTGGGGTAGACCACGACTA
CAGCACAACGGCTTATCTTTATCGCTACTGGTGGGCGGCCCTGGGTTTCCATCCAGATCGAGATTTAGAATTGGTGACTT
TTGCGCCCACGGAGTTGCGTCATAAGTTGCAGGCAGGGTTGATCCAAGGCTACTGCAGCCAAGAACCTTGGGGACAAGAG
GCGATCGCCACCGATTCTGGTTTTATTCAATACCTCTCAGGGGATATTTGGCAGGGCCACCCGGGGCCGGTGATTACCAC
CAGTGCAGGCTGGCGAGAAGAAAACCCAAATACAGCTAAGGCTCTCATTGCCGCCACCCTCCAGGGTTGCCAATATTGCC
AAGACCCCACCAACGCGGCCACCATTGGCCCGCTCTTGGCCAGTAACCTTGACCTTGATCCCGCCGCCCTCACCGCCCTC
TTCAGTGGCCAATATTTCTACGGGGGAGACGGCGATCGCCCTATTGCCCGGCGGGATAGTCCCATTTGGTTTGACCAAGG
GCGACGGATTACGGCCCCCGACCAGGCTAATTATTGCTGGCAATCCCATGGCCTGTGGCTCCTCACCCAGATGGTTCGCT
GGCAACATTTTGAGCTTCGACAATATCCCCAAAATGCCCGCGAACTGGTGGCGGCAGCCTATCCCCCGGAACCCTACGGG
GCGATCGCCCCGGGATTTGGGTTACGTTTACCGCCTGAGTCTTTTAAGTCAGAGATTCACTTCATTGACCAACGGGCTTT
TTTACCGAACCAAGTGGCCAGTTATCTTAACCAGTTTAAAATCCGCACCTGA

Upstream 100 bases:

>100_bases
CTCGCTGCCCTGGGGATTTTTTGATGGTGGAACCGTCACAGAAAATTGCGATCGCCAAACCGAACCCGTAAAATTTGGGA
GCCTCCCTGTATTTTTGCCT

Downstream 100 bases:

>100_bases
CCCTATTTCCCGATACAAAAACGGCTAAAGATCCGATCCAAAACCGATTCAGTCACCCCTTCGCCGGTAATTTCCCCTAG
GGCCTGGATCGCACTGCGTA

Product: nitrate transport protein, NrtC like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKRRHLLKYGTFAAWGYGLTACNRLPDTVRLPGRSAKQANLESTPPILDLSAPEKQTLTLGYVPDLAIAPWLMALTQGFF
EQYGLEVELYPQVDQQAVEQGLLESRFDAAITSFSTPLIYQLKSPRVDLVALMQIHRHGGVFCGCQQTWADNIRSGIDYA
NFAEFAAAYRDYVRALPEKTFGVDHDYSTTAYLYRYWWAALGFHPDRDLELVTFAPTELRHKLQAGLIQGYCSQEPWGQE
AIATDSGFIQYLSGDIWQGHPGPVITTSAGWREENPNTAKALIAATLQGCQYCQDPTNAATIGPLLASNLDLDPAALTAL
FSGQYFYGGDGDRPIARRDSPIWFDQGRRITAPDQANYCWQSHGLWLLTQMVRWQHFELRQYPQNARELVAAAYPPEPYG
AIAPGFGLRLPPESFKSEIHFIDQRAFLPNQVASYLNQFKIRT

Sequences:

>Translated_443_residues
MKRRHLLKYGTFAAWGYGLTACNRLPDTVRLPGRSAKQANLESTPPILDLSAPEKQTLTLGYVPDLAIAPWLMALTQGFF
EQYGLEVELYPQVDQQAVEQGLLESRFDAAITSFSTPLIYQLKSPRVDLVALMQIHRHGGVFCGCQQTWADNIRSGIDYA
NFAEFAAAYRDYVRALPEKTFGVDHDYSTTAYLYRYWWAALGFHPDRDLELVTFAPTELRHKLQAGLIQGYCSQEPWGQE
AIATDSGFIQYLSGDIWQGHPGPVITTSAGWREENPNTAKALIAATLQGCQYCQDPTNAATIGPLLASNLDLDPAALTAL
FSGQYFYGGDGDRPIARRDSPIWFDQGRRITAPDQANYCWQSHGLWLLTQMVRWQHFELRQYPQNARELVAAAYPPEPYG
AIAPGFGLRLPPESFKSEIHFIDQRAFLPNQVASYLNQFKIRT
>Mature_443_residues
MKRRHLLKYGTFAAWGYGLTACNRLPDTVRLPGRSAKQANLESTPPILDLSAPEKQTLTLGYVPDLAIAPWLMALTQGFF
EQYGLEVELYPQVDQQAVEQGLLESRFDAAITSFSTPLIYQLKSPRVDLVALMQIHRHGGVFCGCQQTWADNIRSGIDYA
NFAEFAAAYRDYVRALPEKTFGVDHDYSTTAYLYRYWWAALGFHPDRDLELVTFAPTELRHKLQAGLIQGYCSQEPWGQE
AIATDSGFIQYLSGDIWQGHPGPVITTSAGWREENPNTAKALIAATLQGCQYCQDPTNAATIGPLLASNLDLDPAALTAL
FSGQYFYGGDGDRPIARRDSPIWFDQGRRITAPDQANYCWQSHGLWLLTQMVRWQHFELRQYPQNARELVAAAYPPEPYG
AIAPGFGLRLPPESFKSEIHFIDQRAFLPNQVASYLNQFKIRT

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 49800; Mature: 49800

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRHLLKYGTFAAWGYGLTACNRLPDTVRLPGRSAKQANLESTPPILDLSAPEKQTLTL
CCCCHHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCEEEE
GYVPDLAIAPWLMALTQGFFEQYGLEVELYPQVDQQAVEQGLLESRFDAAITSFSTPLIY
ECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QLKSPRVDLVALMQIHRHGGVFCGCQQTWADNIRSGIDYANFAEFAAAYRDYVRALPEKT
EECCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
FGVDHDYSTTAYLYRYWWAALGFHPDRDLELVTFAPTELRHKLQAGLIQGYCSQEPWGQE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
AIATDSGFIQYLSGDIWQGHPGPVITTSAGWREENPNTAKALIAATLQGCQYCQDPTNAA
HHCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
TIGPLLASNLDLDPAALTALFSGQYFYGGDGDRPIARRDSPIWFDQGRRITAPDQANYCW
HHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCCEECCCCCCCCHH
QSHGLWLLTQMVRWQHFELRQYPQNARELVAAAYPPEPYGAIAPGFGLRLPPESFKSEIH
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FIDQRAFLPNQVASYLNQFKIRT
HHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRRHLLKYGTFAAWGYGLTACNRLPDTVRLPGRSAKQANLESTPPILDLSAPEKQTLTL
CCCCHHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCEEEE
GYVPDLAIAPWLMALTQGFFEQYGLEVELYPQVDQQAVEQGLLESRFDAAITSFSTPLIY
ECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QLKSPRVDLVALMQIHRHGGVFCGCQQTWADNIRSGIDYANFAEFAAAYRDYVRALPEKT
EECCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
FGVDHDYSTTAYLYRYWWAALGFHPDRDLELVTFAPTELRHKLQAGLIQGYCSQEPWGQE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCC
AIATDSGFIQYLSGDIWQGHPGPVITTSAGWREENPNTAKALIAATLQGCQYCQDPTNAA
HHCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
TIGPLLASNLDLDPAALTALFSGQYFYGGDGDRPIARRDSPIWFDQGRRITAPDQANYCW
HHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCEECCCCEECCCCCCCCHH
QSHGLWLLTQMVRWQHFELRQYPQNARELVAAAYPPEPYGAIAPGFGLRLPPESFKSEIH
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FIDQRAFLPNQVASYLNQFKIRT
HHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]