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The map label for this gene is ssb

Identifier: 170077786

GI number: 170077786

Start: 1200486

End: 1200932

Strand: Direct

Name: ssb

Synonym: SYNPCC7002_A1169

Alternate gene names: NA

Gene position: 1200486-1200932 (Clockwise)

Preceding gene: 170077785

Following gene: 170077787

Centisome position: 39.91

GC content: 56.82

Gene sequence:

>447_bases
ATGGCGCGCATCCTAGGGGAACCAGAACTGCGCTATACCCCAGACAATACTCCCCTGGCTCAGATCACCATCGAATTTCC
GGCGCTCCGGGAGGGAGACCCCGCCTGCCGACTCAAGGCCGTGGGTTGGGGCGATAACCTCAGCCAAGACATCCAGCAAA
ATTACCATGACGGTGATCAAGTGATCTTGACGGGACGACTGACGATGAACACCATCGAACGACCCGAAGGCTTTAAGGAA
AAGAAGGCAGAGTTAGTGATTTCGCAAATCCAAGCTATTGGTGCTGGTCTAGGCCCCACCTCTCCTGGAACGACCATGAC
CCCTTCTGCTTCGACTTCACCCGTCACCCCCAGTAACGTGGTGCCCATCAACCCCATGGCTCCTGCTCCTAGTCCTGCCC
CGGCTCCCAGTGAACCGGAACCGAACCTCGATGACATCCCGTTTTAG

Upstream 100 bases:

>100_bases
GGTCTCCGCTTCTAAACGGCAACCCGTGGCTTTAAAAAAGTACAATTGAACCGTATGTTAGGCGATCGCCAACCGAGACG
AAATGAATAGTTGTGTATTA

Downstream 100 bases:

>100_bases
ACTGTGAACCTAGGCGATACCATTGTTGCGATCGCCAGTGCCGTCGTCCCAAACCAAGGCAGCATTGGCATTGTCCGTCT
ATCTGGCGCAGCGGCTCTCC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MARILGEPELRYTPDNTPLAQITIEFPALREGDPACRLKAVGWGDNLSQDIQQNYHDGDQVILTGRLTMNTIERPEGFKE
KKAELVISQIQAIGAGLGPTSPGTTMTPSASTSPVTPSNVVPINPMAPAPSPAPAPSEPEPNLDDIPF

Sequences:

>Translated_148_residues
MARILGEPELRYTPDNTPLAQITIEFPALREGDPACRLKAVGWGDNLSQDIQQNYHDGDQVILTGRLTMNTIERPEGFKE
KKAELVISQIQAIGAGLGPTSPGTTMTPSASTSPVTPSNVVPINPMAPAPSPAPAPSEPEPNLDDIPF
>Mature_147_residues
ARILGEPELRYTPDNTPLAQITIEFPALREGDPACRLKAVGWGDNLSQDIQQNYHDGDQVILTGRLTMNTIERPEGFKEK
KAELVISQIQAIGAGLGPTSPGTTMTPSASTSPVTPSNVVPINPMAPAPSPAPAPSEPEPNLDDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15767; Mature: 15636

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARILGEPELRYTPDNTPLAQITIEFPALREGDPACRLKAVGWGDNLSQDIQQNYHDGDQ
CCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCE
VILTGRLTMNTIERPEGFKEKKAELVISQIQAIGAGLGPTSPGTTMTPSASTSPVTPSNV
EEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCE
VPINPMAPAPSPAPAPSEPEPNLDDIPF
EECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARILGEPELRYTPDNTPLAQITIEFPALREGDPACRLKAVGWGDNLSQDIQQNYHDGDQ
CCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCE
VILTGRLTMNTIERPEGFKEKKAELVISQIQAIGAGLGPTSPGTTMTPSASTSPVTPSNV
EEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCE
VPINPMAPAPSPAPAPSEPEPNLDDIPF
EECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]