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The map label for this gene is fni [H]

Identifier: 170077750

GI number: 170077750

Start: 1165385

End: 1166413

Strand: Reverse

Name: fni [H]

Synonym: SYNPCC7002_A1132

Alternate gene names: 170077750

Gene position: 1166413-1165385 (Counterclockwise)

Preceding gene: 170077751

Following gene: 170077749

Centisome position: 38.78

GC content: 54.62

Gene sequence:

>1029_bases
ATGACTGACAGCACCCAAGTTCGCAAAGCCGACCATATCCGCATCTGTCTCGAAGAAGATGTCCAATTTCGCCACAATCG
CGCCGGTTTTGAACGGTACCGTTTTGAGCACTGCTGTCTGCCTGAATTAGACTGCGCCGACATTGATTTGAATACCTCCT
TTTTAGGGAAGCGCCTCGGTGCACCGATTCTGATTTCTTCGATGACCGGAGGGACAGCCCAGGCCCAGCAGATTAACTTT
CGCTTGGCAGAAGTTGCCCAAACCCATCGGCTCGCCATGGGGGTTGGTTCTCAACGGGTCGCCCTCGAGAAACCAGAGGT
GGCGGCTACTTTTGCAGTCCGTCAAAAAGCCCCAGATGCTCTCCTGTTTGCGAATATTGGCGCAGTGCAACTCAATTATG
GGTATGGCGTAGAGGAATGCCGCAAAATTGTTGATTTGCTCGAAGCTGATGCGCTAATTCTCCATCTCAACCCCCTCCAG
GAATGTATCCAACCCCAGGGGGACACGAATTTTAAGGGGCTATTGGACAAAATTGAACAGGTCTGTCACCAACTGCCCGT
GCCTGTGATCGCCAAAGAAGTAGGCAATGGGATCTCCGTCAAAATGGTGCAACGCCTCCGGGAAGTGGGGGTACAAATCA
TTGATGTGGCTGGGGCGGGCGGCACCTCCTGGGCGAAGGTAGAAGCGGCGCGATCGCCAAACCAACTCTTGCGCAATCTG
GGGCAAACCTTCGGGGACTGGGGAATTCCTACGGCGGACTGTCTGGCGGCGATCGCCCATTACGATCCCGAAATTCCCCT
CATTGCTTCCGGGGGCCTGCGGAACGGTTTAGATGGGGCCAAGGCGATCGCCCTGGGAGCTGACCTCGTGGGCTATGCCC
AACCCTTTCTCAAGGCGGCGAGTGAATCCCCAGAGGCTTTGGCCGAGTGGGTCGAACTGCTGCTATTGGAATTGCGGACA
GTGTTGTTTTGTACGGGTAATGCTAATTTTCAGCAACTGCAACGGGCGAATTGCCTGCACAAGTTCTAA

Upstream 100 bases:

>100_bases
CCATCGCCTTGAAAGTTTGAAATATTGCAATCCATTGACGAATGCCGAGAACCCAGAGGGGATTCTGTACAATTTGGGGA
GCTTAAACCTTACCTAACCC

Downstream 100 bases:

>100_bases
GGTAAAAACTAAGACCTCTTTCCCGAATGCCTCAACCATGAAAGATTTTTTTAAACAGGTTTTTAGCAGTTGCCTCGGTA
CCCTGATTGCCCTCAGCCTT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTDSTQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLGAPILISSMTGGTAQAQQINF
RLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDALLFANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQ
ECIQPQGDTNFKGLLDKIEQVCHQLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNL
GQTFGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAASESPEALAEWVELLLLELRT
VLFCTGNANFQQLQRANCLHKF

Sequences:

>Translated_342_residues
MTDSTQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLGAPILISSMTGGTAQAQQINF
RLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDALLFANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQ
ECIQPQGDTNFKGLLDKIEQVCHQLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNL
GQTFGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAASESPEALAEWVELLLLELRT
VLFCTGNANFQQLQRANCLHKF
>Mature_341_residues
TDSTQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLGAPILISSMTGGTAQAQQINFR
LAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDALLFANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQE
CIQPQGDTNFKGLLDKIEQVCHQLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNLG
QTFGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAASESPEALAEWVELLLLELRTV
LFCTGNANFQQLQRANCLHKF

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 37246; Mature: 37115

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSTQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLG
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
APILISSMTGGTAQAQQINFRLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDA
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCE
LLFANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQECIQPQGDTNFKGLLDKIEQ
EEEECCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHH
VCHQLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNL
HHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHH
GQTFGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAA
HHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SESPEALAEWVELLLLELRTVLFCTGNANFQQLQRANCLHKF
CCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TDSTQVRKADHIRICLEEDVQFRHNRAGFERYRFEHCCLPELDCADIDLNTSFLGKRLG
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
APILISSMTGGTAQAQQINFRLAEVAQTHRLAMGVGSQRVALEKPEVAATFAVRQKAPDA
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCE
LLFANIGAVQLNYGYGVEECRKIVDLLEADALILHLNPLQECIQPQGDTNFKGLLDKIEQ
EEEECCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHH
VCHQLPVPVIAKEVGNGISVKMVQRLREVGVQIIDVAGAGGTSWAKVEAARSPNQLLRNL
HHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHH
GQTFGDWGIPTADCLAAIAHYDPEIPLIASGGLRNGLDGAKAIALGADLVGYAQPFLKAA
HHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SESPEALAEWVELLLLELRTVLFCTGNANFQQLQRANCLHKF
CCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA