| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077742
Identifier: 170077742
GI number: 170077742
Start: 1156113
End: 1157429
Strand: Reverse
Name: 170077742
Synonym: SYNPCC7002_A1124
Alternate gene names: NA
Gene position: 1157429-1156113 (Counterclockwise)
Preceding gene: 170077743
Following gene: 170077741
Centisome position: 38.48
GC content: 51.94
Gene sequence:
>1317_bases ATGCAAGCTTCTGGTATTTTGCGCCAAATTTCCACTGGCGGTGTTCAAGCCCCACTGCTGCCCGATTTTTCCCTTGATCA TCGTCAAGAAATTCTCATTGGCCGCGAACCCAGTTGCCAGATTGCCCTCAACCCCAATCTTTACACCGTTGTCTCCCGTC GCCACGTTCTGATTCGTCCCCAGGGTCAAGGTTGGGAAGCCGTTGATCTCGGCAGTGCGAATGGCACCTTTATCAATGGT CAACGGTTACAAGGTTCACGAATCCTGCAAGCAGGCGATCGCCTCACCCTCGGAGACAATGGCCCCAGCTTTAGTTTCGA GCTCCAGAGCCAAGGCCACAATCCCCAGGCTCCCCTCGATCCCGGTTCCCATATCCCTGTCCCCGGCCCCATTGTCAGTC CCAACTCCAACCTCACCCTGACCCAACTTTTTCCCATCGCCGCCACCGGGAAAGACCTCTCCAGCAAAGCCTATCTCGTG CCGGGGATCCTCACCGTTATTTTTGTCGTCCTCATGTTCGCCACCATTGGCGCACCTGGACTCTTTAATTTTTTACTGGG AACCTATATTGCTGGGGCCGCTTTCTACTACATTTATCAACTCTGTGGTAAGCGTAAAGCTTGGATCGTTATACTTGGTT CCGGCTTCCTTACAGCCCTCATGTTAGTTACCCCGGTTGTTGACTTATTCATTTTTGTATTTCGAGTCATTCTGCCGGGC AATATCAGTGACGCTGATGGCGTGGGTCGGCTCTTCGTCGGCATGTTTTTTGGTGCTGGCCTGATGGAAGAAATTTTGAA GGCGATCCCTATTTTCGTCGCCATGGGCATCGGCAACCTGTTTGGCCCGAAACGTCGCGAAAAAATTGGTGTCACCGAAC CCCTCGATGGTATTTTGCTTGGAGCAGCCTCCGCCGTCGGTTTTACCCTGATTGAAACCCTCGGTCAGTACGTCCCCAAC ATCATTAACGAAGTTTCCCTTCAAGTCGATCCCGGCACAGGGGAATTACTCGGTTTACAACTGCTCATTCCCAGAATCCT CGGTTCCGTAGCTGGGCACATGGCCTACAGCGGTTATTTCGGTTATTTCATCGGTCTCAGTGTCCTCAAACCATCAAAGT CTGTACAGATCTTAATTATTGGTTGCCTTACCTCCTCGTTACTCCATGCCCTTTGGAATACTGTCGGCTCCTTCAGTAGT ATCCTGTTGGCGGTGGTGGGGGTTTTTTCCTATGCCTTTCTTGCTGCGGCAATCCTCAAGGCCCGCGCCCTTTCTCCGAC CCGCGCAGAAAATTTTGCCACCCGCATTGCAAAATAA
Upstream 100 bases:
>100_bases ATTTACAAAAATATCTTTAAGATCCGGCAATCTATCGTTATAACTAAAGTTGAGGCGGGGCGCTCCTCCGTCTTTTGCGT TTTAGAAAAAAATTATTACG
Downstream 100 bases:
>100_bases TCTGGCCTAAATCTAAAACGAGAATCTCCGACCCCCACCACGATTTTGTGACGGAGAAGTTGCCATAATAGAATTTACAA AAATTCACTTTTCCTAGACC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; FHA Domain Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK
Sequences:
>Translated_438_residues MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK >Mature_438_residues MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46651; Mature: 46651
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRP CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEECCCEEEEEECCEEEEEC QGQGWEAVDLGSANGTFINGQRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLD CCCCCCEEECCCCCCCEECCCCCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCC PGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLVPGILTVIFVVLMFATIGAPG CCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH LFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILL CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH GAASAVGFTLIETLGQYVPNIINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYF HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSSILLAVVGVFSYAFLAAAILK HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALSPTRAENFATRIAK HHCCCCHHHHHHHHHHCC >Mature Secondary Structure MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRP CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEECCCEEEEEECCEEEEEC QGQGWEAVDLGSANGTFINGQRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLD CCCCCCEEECCCCCCCEECCCCCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCC PGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLVPGILTVIFVVLMFATIGAPG CCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH LFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILL CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH GAASAVGFTLIETLGQYVPNIINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYF HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSSILLAVVGVFSYAFLAAAILK HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALSPTRAENFATRIAK HHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA