Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077742

Identifier: 170077742

GI number: 170077742

Start: 1156113

End: 1157429

Strand: Reverse

Name: 170077742

Synonym: SYNPCC7002_A1124

Alternate gene names: NA

Gene position: 1157429-1156113 (Counterclockwise)

Preceding gene: 170077743

Following gene: 170077741

Centisome position: 38.48

GC content: 51.94

Gene sequence:

>1317_bases
ATGCAAGCTTCTGGTATTTTGCGCCAAATTTCCACTGGCGGTGTTCAAGCCCCACTGCTGCCCGATTTTTCCCTTGATCA
TCGTCAAGAAATTCTCATTGGCCGCGAACCCAGTTGCCAGATTGCCCTCAACCCCAATCTTTACACCGTTGTCTCCCGTC
GCCACGTTCTGATTCGTCCCCAGGGTCAAGGTTGGGAAGCCGTTGATCTCGGCAGTGCGAATGGCACCTTTATCAATGGT
CAACGGTTACAAGGTTCACGAATCCTGCAAGCAGGCGATCGCCTCACCCTCGGAGACAATGGCCCCAGCTTTAGTTTCGA
GCTCCAGAGCCAAGGCCACAATCCCCAGGCTCCCCTCGATCCCGGTTCCCATATCCCTGTCCCCGGCCCCATTGTCAGTC
CCAACTCCAACCTCACCCTGACCCAACTTTTTCCCATCGCCGCCACCGGGAAAGACCTCTCCAGCAAAGCCTATCTCGTG
CCGGGGATCCTCACCGTTATTTTTGTCGTCCTCATGTTCGCCACCATTGGCGCACCTGGACTCTTTAATTTTTTACTGGG
AACCTATATTGCTGGGGCCGCTTTCTACTACATTTATCAACTCTGTGGTAAGCGTAAAGCTTGGATCGTTATACTTGGTT
CCGGCTTCCTTACAGCCCTCATGTTAGTTACCCCGGTTGTTGACTTATTCATTTTTGTATTTCGAGTCATTCTGCCGGGC
AATATCAGTGACGCTGATGGCGTGGGTCGGCTCTTCGTCGGCATGTTTTTTGGTGCTGGCCTGATGGAAGAAATTTTGAA
GGCGATCCCTATTTTCGTCGCCATGGGCATCGGCAACCTGTTTGGCCCGAAACGTCGCGAAAAAATTGGTGTCACCGAAC
CCCTCGATGGTATTTTGCTTGGAGCAGCCTCCGCCGTCGGTTTTACCCTGATTGAAACCCTCGGTCAGTACGTCCCCAAC
ATCATTAACGAAGTTTCCCTTCAAGTCGATCCCGGCACAGGGGAATTACTCGGTTTACAACTGCTCATTCCCAGAATCCT
CGGTTCCGTAGCTGGGCACATGGCCTACAGCGGTTATTTCGGTTATTTCATCGGTCTCAGTGTCCTCAAACCATCAAAGT
CTGTACAGATCTTAATTATTGGTTGCCTTACCTCCTCGTTACTCCATGCCCTTTGGAATACTGTCGGCTCCTTCAGTAGT
ATCCTGTTGGCGGTGGTGGGGGTTTTTTCCTATGCCTTTCTTGCTGCGGCAATCCTCAAGGCCCGCGCCCTTTCTCCGAC
CCGCGCAGAAAATTTTGCCACCCGCATTGCAAAATAA

Upstream 100 bases:

>100_bases
ATTTACAAAAATATCTTTAAGATCCGGCAATCTATCGTTATAACTAAAGTTGAGGCGGGGCGCTCCTCCGTCTTTTGCGT
TTTAGAAAAAAATTATTACG

Downstream 100 bases:

>100_bases
TCTGGCCTAAATCTAAAACGAGAATCTCCGACCCCCACCACGATTTTGTGACGGAGAAGTTGCCATAATAGAATTTACAA
AAATTCACTTTTCCTAGACC

Product: FHA domain-containing protein

Products: NA

Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; FHA Domain Protein

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING
QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV
PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG
NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN
IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS
ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK

Sequences:

>Translated_438_residues
MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING
QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV
PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG
NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN
IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS
ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK
>Mature_438_residues
MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFING
QRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLDPGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLV
PGILTVIFVVLMFATIGAPGLFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG
NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILLGAASAVGFTLIETLGQYVPN
IINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYFGYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSS
ILLAVVGVFSYAFLAAAILKARALSPTRAENFATRIAK

Specific function: Unknown

COG id: COG2339

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46651; Mature: 46651

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRP
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEECCCEEEEEECCEEEEEC
QGQGWEAVDLGSANGTFINGQRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLD
CCCCCCEEECCCCCCCEECCCCCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCC
PGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLVPGILTVIFVVLMFATIGAPG
CCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
LFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILL
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH
GAASAVGFTLIETLGQYVPNIINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYF
HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSSILLAVVGVFSYAFLAAAILK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARALSPTRAENFATRIAK
HHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQASGILRQISTGGVQAPLLPDFSLDHRQEILIGREPSCQIALNPNLYTVVSRRHVLIRP
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEECCCEEEEEECCEEEEEC
QGQGWEAVDLGSANGTFINGQRLQGSRILQAGDRLTLGDNGPSFSFELQSQGHNPQAPLD
CCCCCCEEECCCCCCCEECCCCCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCC
PGSHIPVPGPIVSPNSNLTLTQLFPIAATGKDLSSKAYLVPGILTVIFVVLMFATIGAPG
CCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
LFNFLLGTYIAGAAFYYIYQLCGKRKAWIVILGSGFLTALMLVTPVVDLFIFVFRVILPG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
NISDADGVGRLFVGMFFGAGLMEEILKAIPIFVAMGIGNLFGPKRREKIGVTEPLDGILL
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH
GAASAVGFTLIETLGQYVPNIINEVSLQVDPGTGELLGLQLLIPRILGSVAGHMAYSGYF
HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYFIGLSVLKPSKSVQILIIGCLTSSLLHALWNTVGSFSSILLAVVGVFSYAFLAAAILK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARALSPTRAENFATRIAK
HHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA