| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hslO
Identifier: 170077741
GI number: 170077741
Start: 1155115
End: 1156011
Strand: Reverse
Name: hslO
Synonym: SYNPCC7002_A1123
Alternate gene names: 170077741
Gene position: 1156011-1155115 (Counterclockwise)
Preceding gene: 170077742
Following gene: 170077739
Centisome position: 38.43
GC content: 52.84
Gene sequence:
>897_bases ATGGCAGATCAACTCATTCGCGGTACCGCAGCAGACAATGGCATTCGGGTAGTGGGCGTTATTTCCACAAATCTCACTGA GGAAGCCCGACAACGCCATAAATTATCCTATGTGGCGACGGCTGCCCTAGGTCGCACCATGGCTTCGGCCCTGTTGATTT CTTCAAGTATGAAAAAACAGGAAGCCCGCCTCAATCTGCGCATCAAAGGCGATGGCCCCCTGGGGGGATTATTGGTGGAT GCTGGCCCAGATGGCACCGTGCGGGGCTATGTACAAAATCCAGGCGTGGAGTTACCCCCCAATGCAAAGGGAAAGTTAGA CGTGGGCGGCGCTGTAGGCAAAGGATTTCTTTATGCGGTAAAAGATTTTGGCCGGGGCTACCCTTACTCCAGTACGGTAG AGTTGGTTTCTGGGGAGATTGGCGATGATGTTACCCATTATTTAGCAACCTCGGAACAAACCCCTTCGGCGTTGTTAGTG GGGGTCTTTGTTGGCGCAGAAGGAGTCACTGCCGCTGGGGGAATTTTGCTGCAGATCTTACCGAAAGCGGCCCGTGACGA GAGCTTAGTCGCCAAACTAGAAAGTCGCCTAGGGCAATTATCGGGCTTTACGCCGCTATTGCAGCAGGGCAAGTCTCTCC ATGATATTTTCCAGGATCTCCTCGGCGATGAAGACCTCAACATTTTCCCAGAGACACAAATGGTGCGCTTTGACTGCGGC TGTACCTTTGAGCGGATGATGGGTGCCCTGAAGATGTTGGGCCAGGATGAGTTGCTGGATATGATCGAAAAAGATGGCGG GGCAGAGGCCACCTGCAATTTCTGCAACGAGGTGTACCATGCGGATGTGGATCACCTGAGTCGCTTGGTTGAGGAATTAA AGGCTGATGCCCATTAG
Upstream 100 bases:
>100_bases CTGGCCTAAATCTAAAACGAGAATCTCCGACCCCCACCACGATTTTGTGACGGAGAAGTTGCCATAATAGAATTTACAAA AATTCACTTTTCCTAGACCT
Downstream 100 bases:
>100_bases AGAACGCTTTCTAGGGAAAGTTTTTTTCTAAGGAAGAATTTTAAGGATTATTCCTGGAGCATCCAAAACCCGGCAAATTG TTCTTCGTCGGGGCTTTTTT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MADQLIRGTAADNGIRVVGVISTNLTEEARQRHKLSYVATAALGRTMASALLISSSMKKQEARLNLRIKGDGPLGGLLVD AGPDGTVRGYVQNPGVELPPNAKGKLDVGGAVGKGFLYAVKDFGRGYPYSSTVELVSGEIGDDVTHYLATSEQTPSALLV GVFVGAEGVTAAGGILLQILPKAARDESLVAKLESRLGQLSGFTPLLQQGKSLHDIFQDLLGDEDLNIFPETQMVRFDCG CTFERMMGALKMLGQDELLDMIEKDGGAEATCNFCNEVYHADVDHLSRLVEELKADAH
Sequences:
>Translated_298_residues MADQLIRGTAADNGIRVVGVISTNLTEEARQRHKLSYVATAALGRTMASALLISSSMKKQEARLNLRIKGDGPLGGLLVD AGPDGTVRGYVQNPGVELPPNAKGKLDVGGAVGKGFLYAVKDFGRGYPYSSTVELVSGEIGDDVTHYLATSEQTPSALLV GVFVGAEGVTAAGGILLQILPKAARDESLVAKLESRLGQLSGFTPLLQQGKSLHDIFQDLLGDEDLNIFPETQMVRFDCG CTFERMMGALKMLGQDELLDMIEKDGGAEATCNFCNEVYHADVDHLSRLVEELKADAH >Mature_297_residues ADQLIRGTAADNGIRVVGVISTNLTEEARQRHKLSYVATAALGRTMASALLISSSMKKQEARLNLRIKGDGPLGGLLVDA GPDGTVRGYVQNPGVELPPNAKGKLDVGGAVGKGFLYAVKDFGRGYPYSSTVELVSGEIGDDVTHYLATSEQTPSALLVG VFVGAEGVTAAGGILLQILPKAARDESLVAKLESRLGQLSGFTPLLQQGKSLHDIFQDLLGDEDLNIFPETQMVRFDCGC TFERMMGALKMLGQDELLDMIEKDGGAEATCNFCNEVYHADVDHLSRLVEELKADAH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=283, Percent_Identity=24.0282685512367, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_SYNP2 (B1XJZ5)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001734379.1 - ProteinModelPortal: B1XJZ5 - SMR: B1XJZ5 - GeneID: 6057035 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A1123 - HOGENOM: HBG286231 - OMA: QRHKLSY - ProtClustDB: PRK00114 - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 31765; Mature: 31633
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQLIRGTAADNGIRVVGVISTNLTEEARQRHKLSYVATAALGRTMASALLISSSMKKQ CCCCHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARLNLRIKGDGPLGGLLVDAGPDGTVRGYVQNPGVELPPNAKGKLDVGGAVGKGFLYAV HCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHH KDFGRGYPYSSTVELVSGEIGDDVTHYLATSEQTPSALLVGVFVGAEGVTAAGGILLQIL HHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCHHEEEEEEECCCCCCHHHHHHHHHH PKAARDESLVAKLESRLGQLSGFTPLLQQGKSLHDIFQDLLGDEDLNIFPETQMVRFDCG HHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECC CTFERMMGALKMLGQDELLDMIEKDGGAEATCNFCNEVYHADVDHLSRLVEELKADAH CCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ADQLIRGTAADNGIRVVGVISTNLTEEARQRHKLSYVATAALGRTMASALLISSSMKKQ CCCHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARLNLRIKGDGPLGGLLVDAGPDGTVRGYVQNPGVELPPNAKGKLDVGGAVGKGFLYAV HCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHH KDFGRGYPYSSTVELVSGEIGDDVTHYLATSEQTPSALLVGVFVGAEGVTAAGGILLQIL HHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCHHEEEEEEECCCCCCHHHHHHHHHH PKAARDESLVAKLESRLGQLSGFTPLLQQGKSLHDIFQDLLGDEDLNIFPETQMVRFDCG HHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECC CTFERMMGALKMLGQDELLDMIEKDGGAEATCNFCNEVYHADVDHLSRLVEELKADAH CCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA