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The map label for this gene is ycgF [C]

Identifier: 170077739

GI number: 170077739

Start: 1153572

End: 1154009

Strand: Reverse

Name: ycgF [C]

Synonym: SYNPCC7002_A1121

Alternate gene names: 170077739

Gene position: 1154009-1153572 (Counterclockwise)

Preceding gene: 170077741

Following gene: 170077738

Centisome position: 38.36

GC content: 46.35

Gene sequence:

>438_bases
ATGGCGCTTTATCGACTTATTTACGTTAGCCAGGCGATCGCCGAGCTAGAATACCGCGATCTCATCGAAATTTTGCAAAA
ATCGGAGTTTAACAATCGTCGAGCTGGAATTACGGGGATGTTAGCCTTTGGCGATTTGATGTTTTTACAAATTTTGGAAG
GGAGTCGGCGGGCCATTAGTGAAACTTACAATCGCATTTTGCTAGATTCGCGCCACACCAACGCCGAATTAATCGAGTTT
TCAGAAATTGACCAGCGCGACTTTGGGATCTGGTCGATGAAGGTTTTGCAACTGAATAATCAGGACGAAGTGCGGCAGAT
TATCCTGAAATATTCCCATTCAGAGACCTTTTCGCCCGTTTCGATGACCGGCCCCCAGAGCCTTAATTTTTTGCGAGAAA
TCACAGCCCTCTATCACCAGGGAGGCATCCAGCAATAG

Upstream 100 bases:

>100_bases
AGCTGGGGAGTAACCAGGCGATCACCTTCTTGATCACCGCCGGAGATGAATTTTTTTTGGTAGTCTTATACACGTTATTT
CGGGGTGGAAACACAAAACC

Downstream 100 bases:

>100_bases
CGCGGCAGCGTCGGGGATTCTTTGTTAGCTTATGTTCTGGACTCTATGCATTTTTTGACGATATTTTTCCGAGGCGATCG
CCATGGCTACCTTTCTCCGG

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein; Blue-Light Sensor BluF Domain; Expression Activator-Related Protein; Activator Of Photopigment And Puc Expression

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MALYRLIYVSQAIAELEYRDLIEILQKSEFNNRRAGITGMLAFGDLMFLQILEGSRRAISETYNRILLDSRHTNAELIEF
SEIDQRDFGIWSMKVLQLNNQDEVRQIILKYSHSETFSPVSMTGPQSLNFLREITALYHQGGIQQ

Sequences:

>Translated_145_residues
MALYRLIYVSQAIAELEYRDLIEILQKSEFNNRRAGITGMLAFGDLMFLQILEGSRRAISETYNRILLDSRHTNAELIEF
SEIDQRDFGIWSMKVLQLNNQDEVRQIILKYSHSETFSPVSMTGPQSLNFLREITALYHQGGIQQ
>Mature_144_residues
ALYRLIYVSQAIAELEYRDLIEILQKSEFNNRRAGITGMLAFGDLMFLQILEGSRRAISETYNRILLDSRHTNAELIEFS
EIDQRDFGIWSMKVLQLNNQDEVRQIILKYSHSETFSPVSMTGPQSLNFLREITALYHQGGIQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16834; Mature: 16702

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYRLIYVSQAIAELEYRDLIEILQKSEFNNRRAGITGMLAFGDLMFLQILEGSRRAIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
ETYNRILLDSRHTNAELIEFSEIDQRDFGIWSMKVLQLNNQDEVRQIILKYSHSETFSPV
HHHHHHHHCCCCCCCHHEEHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCC
SMTGPQSLNFLREITALYHQGGIQQ
CCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALYRLIYVSQAIAELEYRDLIEILQKSEFNNRRAGITGMLAFGDLMFLQILEGSRRAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
ETYNRILLDSRHTNAELIEFSEIDQRDFGIWSMKVLQLNNQDEVRQIILKYSHSETFSPV
HHHHHHHHCCCCCCCHHEEHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCC
SMTGPQSLNFLREITALYHQGGIQQ
CCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA