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The map label for this gene is secY [H]

Identifier: 170077667

GI number: 170077667

Start: 1079775

End: 1081094

Strand: Reverse

Name: secY [H]

Synonym: SYNPCC7002_A1047

Alternate gene names: 170077667

Gene position: 1081094-1079775 (Counterclockwise)

Preceding gene: 170077668

Following gene: 170077666

Centisome position: 35.94

GC content: 49.39

Gene sequence:

>1320_bases
ATGGTTGTCAGTCGCGAAAAAACACCAACCGCCCAGGAAACCTTTATGCAAATGGCACAAGCCGCTGGCCTTCGGGGTCG
TCTGCTTGTTACCCTTGGTCTTTTGGTTCTTGTTCGGTTTGGCGTTTTTATTCCAATCCCCGGCATTGACCGGGTGGCCC
TAAGTGAGGGGATCCAAAATTCTCCTCTCTTGGGCTTTCTAGATGTATTTGCCGGTGGTGGTCTTTCCGCTGTCGGCATT
TTTGCCCTAGGGATCCTTCCCTACATCAATGCCTCAATTATTATGCAGCTCATGACGGCGGCTATTCCTGCCCTTGAAGA
CATGCAAAAGAATGATGGTGAGGCTGGGCGTCGTAAAATTTCCCAGATTATCCGTTATGTGACGGTGGGCTGGGCGGCTT
TACAAAGTTTTGGGATCACGCTGCAAATTCTGCGCCCCTATGCTTTAGATCCTGGTTTTACTTTCGTGTTGGAAACCACA
TTAGCACTGACGGCGGGATCTGTCTTTGTGATGTGGATTTCTGAGCTGATTACCGAAAAAGGTTTAGGCAATGGGGCTTC
TCTGTTGATTTTCGTCAACATTGTGGCCGTATTACCAAGAACTTTAGGCAATACTATTGAATTTGCCCAGACTGGTGGTC
GAGCAGTGATTGCTAAAGTCATTTTGCTGCTGGTCGTTTTTCTGATCATGATTGTCGGGATTGTGTTTGTGCAGGAAGGG
ACACGCCGGATTCCGATTGTTTCGGCCCGTCGTCAGGTGGGTCGTAAGCTCTATCGGGAACGCACAAGCTATCTGCCTCT
ACGGCTCAATCAGGGTGGGGTGATGCCGATTATTTTCGCCTCGGCTGTTCTGGTGCTGCCTTCTTCTTTGGCGGGTCTGG
CTGGCTCAGGGGAAGGGTTCTTTGGTCAAGCGATCGCCACAATTTCGACACTGCTACAACCGGGCAGAATTCCCTATGTG
TTGGTCTATCTCGCTTTGATTCTCTTTTTCAGCTATTTCTACGCGTCTTTGATCGTGAATCCGGTAGATATGGCCCAGAA
CTTGAAGAAGATGGGGTCTAGTATTCCTGGCATTCGTCCTGGTCGGGCCACGAGTGAATACCTCGAAAAAGTGATCAATC
GTTTGACCCTATTGGGGGCAATTTTCCTTGGCTTAGTCGCAACGGTTCCTACTTTTGTAGAAGGGGCGACAGGGGTCACG
ACTCTACGGGGTTTTGGGGCCACTTCCCTACTCATCTTGGTGGGGGTTGCGATTGACACAGCCAAGCAAATTCAAACCTA
TGTTATTTCCCAGCGTTATGAAGGCATGGTTAAACAATAG

Upstream 100 bases:

>100_bases
TAGAAAAATTCGGGAACAAAGCACTAAGTTAGAATTTATCAAGGTTGCTTAATACTTCTTAGAACTGTTCATTACGTAAA
CTCCCGAAGAGAACATCACT

Downstream 100 bases:

>100_bases
TGTTTTTAGCAGGGTTTAGATATTAGCTGGAATATCTAAACTCTTTGTTGATTTAGTAAGCAATTTGGATGGGAATAGAG
GCGTTATGGCTCAGGGAGTA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MVVSREKTPTAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQNSPLLGFLDVFAGGGLSAVGI
FALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKISQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETT
LALTAGSVFVMWISELITEKGLGNGASLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILLLVVFLIMIVGIVFVQEG
TRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSGEGFFGQAIATISTLLQPGRIPYV
LVYLALILFFSYFYASLIVNPVDMAQNLKKMGSSIPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVT
TLRGFGATSLLILVGVAIDTAKQIQTYVISQRYEGMVKQ

Sequences:

>Translated_439_residues
MVVSREKTPTAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQNSPLLGFLDVFAGGGLSAVGI
FALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKISQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETT
LALTAGSVFVMWISELITEKGLGNGASLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILLLVVFLIMIVGIVFVQEG
TRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSGEGFFGQAIATISTLLQPGRIPYV
LVYLALILFFSYFYASLIVNPVDMAQNLKKMGSSIPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVT
TLRGFGATSLLILVGVAIDTAKQIQTYVISQRYEGMVKQ
>Mature_439_residues
MVVSREKTPTAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQNSPLLGFLDVFAGGGLSAVGI
FALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKISQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETT
LALTAGSVFVMWISELITEKGLGNGASLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILLLVVFLIMIVGIVFVQEG
TRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSGEGFFGQAIATISTLLQPGRIPYV
LVYLALILFFSYFYASLIVNPVDMAQNLKKMGSSIPGIRPGRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVT
TLRGFGATSLLILVGVAIDTAKQIQTYVISQRYEGMVKQ

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=43.0260047281324, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47126; Mature: 47126

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSREKTPTAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQN
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCC
SPLLGFLDVFAGGGLSAVGIFALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKI
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETTLALTAGSVFVMWISELITEK
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGNGASLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILLLVVFLIMIVGIVFVQEG
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSGEGF
CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
FGQAIATISTLLQPGRIPYVLVYLALILFFSYFYASLIVNPVDMAQNLKKMGSSIPGIRP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
GRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVTTLRGFGATSLLILVGVAIDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHH
AKQIQTYVISQRYEGMVKQ
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVSREKTPTAQETFMQMAQAAGLRGRLLVTLGLLVLVRFGVFIPIPGIDRVALSEGIQN
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCC
SPLLGFLDVFAGGGLSAVGIFALGILPYINASIIMQLMTAAIPALEDMQKNDGEAGRRKI
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SQIIRYVTVGWAALQSFGITLQILRPYALDPGFTFVLETTLALTAGSVFVMWISELITEK
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGNGASLLIFVNIVAVLPRTLGNTIEFAQTGGRAVIAKVILLLVVFLIMIVGIVFVQEG
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRRIPIVSARRQVGRKLYRERTSYLPLRLNQGGVMPIIFASAVLVLPSSLAGLAGSGEGF
CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
FGQAIATISTLLQPGRIPYVLVYLALILFFSYFYASLIVNPVDMAQNLKKMGSSIPGIRP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
GRATSEYLEKVINRLTLLGAIFLGLVATVPTFVEGATGVTTLRGFGATSLLILVGVAIDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHH
AKQIQTYVISQRYEGMVKQ
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]