| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077655
Identifier: 170077655
GI number: 170077655
Start: 1072553
End: 1072876
Strand: Direct
Name: 170077655
Synonym: SYNPCC7002_A1035
Alternate gene names: NA
Gene position: 1072553-1072876 (Clockwise)
Preceding gene: 170077646
Following gene: 170077686
Centisome position: 35.66
GC content: 44.75
Gene sequence:
>324_bases ATGCAAGGACTTAACGACTGTCTCCGCCATAAGGTTGCGTATGTGGCGATCGGTGAATTTAAACCTGGACGGTTTGCCCA GGCCCAAACCCTTTATGAAAAAATTGTGTCCAGCTATTCAGAGGGATTTCAAGGGGCTTTTTTGCTACAAAAAATGGGGC CAAACAGTGAGCAAGGCATTGCGATGATCCTTTGGGACAACATCGAGGATATGGATAAAAATCAGACGGAACTCAGCCAA AAAATTATGGCGGAAATGAATCCTCTCTTTGCAGAACCGCCAGAAACAGATTTTTACCAGGTTTGCAGTGAGGTTCAACC ATAG
Upstream 100 bases:
>100_bases AGGCTTTCTAGGGGGATTCTCTCGCTACAGTGAAATTATTGGCAGAGGCGACAGGCGATCGCCCCAGGCCATGTAATTTT AGACAATGGAAAATTCAACT
Downstream 100 bases:
>100_bases GGAAGGAACTTCTTCCGAGCGGCGATCGCCTTTCCCAGGGAAGAACCCCTTCCGGCCTGCGGCCACCTTCCCCAGGGAAG GATTTATTAGCTTTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQGLNDCLRHKVAYVAIGEFKPGRFAQAQTLYEKIVSSYSEGFQGAFLLQKMGPNSEQGIAMILWDNIEDMDKNQTELSQ KIMAEMNPLFAEPPETDFYQVCSEVQP
Sequences:
>Translated_107_residues MQGLNDCLRHKVAYVAIGEFKPGRFAQAQTLYEKIVSSYSEGFQGAFLLQKMGPNSEQGIAMILWDNIEDMDKNQTELSQ KIMAEMNPLFAEPPETDFYQVCSEVQP >Mature_107_residues MQGLNDCLRHKVAYVAIGEFKPGRFAQAQTLYEKIVSSYSEGFQGAFLLQKMGPNSEQGIAMILWDNIEDMDKNQTELSQ KIMAEMNPLFAEPPETDFYQVCSEVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12127; Mature: 12127
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLNDCLRHKVAYVAIGEFKPGRFAQAQTLYEKIVSSYSEGFQGAFLLQKMGPNSEQGI CCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE AMILWDNIEDMDKNQTELSQKIMAEMNPLFAEPPETDFYQVCSEVQP EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MQGLNDCLRHKVAYVAIGEFKPGRFAQAQTLYEKIVSSYSEGFQGAFLLQKMGPNSEQGI CCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE AMILWDNIEDMDKNQTELSQKIMAEMNPLFAEPPETDFYQVCSEVQP EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA