Click here to switch to the map view.

The map label for this gene is gatA

Identifier: 170077646

GI number: 170077646

Start: 1064549

End: 1066006

Strand: Direct

Name: gatA

Synonym: SYNPCC7002_A1025

Alternate gene names: 170077646

Gene position: 1064549-1066006 (Clockwise)

Preceding gene: 170077642

Following gene: 170077655

Centisome position: 35.39

GC content: 53.16

Gene sequence:

>1458_bases
ATGTCAGCCATCCGCACGCTACACCAACAACTCATTGCAAAGGAACGTTCTGCCGTCGAAATTTTGACGGAAACGTTTGC
CCATATCGAAGCGGTGGAACCCAAGGTTAAAGCGTTTTTAACCCTGACTAAGGAACAAGCCTTGGCCCAGGCGGCGCAAG
TGGATGCAAAAATTGCCGCGGGGGAAACCATTGGCCTCCTAGAAGGCATCCCCATTGCGATCAAGGACAATCTCTGTACG
AAAGGTATTCAGACGACCTGTGCTTCGCGCATCCTCGAAGGCTTTGTGCCGACCTACGAATCGACCGTCACCCAGGAGTT
GCAGGAAGCTGGGGCGATCATGGTGGGCAAAACCAATTTGGATGAGTTTGCCATGGGGAGTTCGACGGAAAATTCTGGCT
ATCAAGTGACGGGTAATCCCTGGGATGTGACGCGGGTACCGGGAGGCTCCTCTGGGGGGTCAGCGGCGGCAGTGGCAGCA
GGGGAAGCCCCAATCGCCCTGGGTTCAGATACCGGCGGTTCGATTCGGCAACCGGCTTCTTTATGTGGGGTTGTGGGCCT
TAAACCGACCTATGGCCTGGTGTCTCGTTTTGGCTTGGTGGCCTATGCGTCTTCTTTGGATCAAATTGGCCCCTTTGCGC
GGACGGTAGAAGATACAGCAATTCTTTTAGAGGCGATCGCCGGCCATGATCCCAAAGATTCCACCAGTTTAGATGTGGAT
ATTCCCCAATATAGTCAGTTACTCCAGCCGGAACTCCCCAAGGATAAGCCCCTGAAAATTGGCATCATCCAAGAAACTTT
TGGGGAAGGGCTCGATCCAGAAGTGGCTGAAGCGGTTCAAAAGGCGATCGCCCAACTTCAGGAACTCGGTGCCGAAGTCG
AAACCATTTCCTGTCCCCGCTTCCGTTACGGCTTACCCGCCTACTACATCATTGCCCCGTCCGAAGCCTCTGCAAATTTG
GCCCGTTACGATGCCGTCAAATATGGCACCCGTAATGCTGCAGCCGATAACCTTGTTGACATGTACACCCAAACCCGGGC
CGCTGGTTTTGGCCCCGAGGTAAAGCGCCGAATTATGCTCGGCACCTATACCCTCTCCGCTGGTTACTATGATGCCTACT
ACCTCAAAGCCCAGAAAGTACGCACTTTAATTAAAAAAGATTTCGATCAAGCCTTTGCCAAAGTGGACGTGCTTATTTGT
CCCACTTCTCCCAGCACCGCTTTCAAAGCTGGCGAAAAAACCGACGATCCCCTCAGTATGTATCTTTCTGACTTGATGAC
CATTCCCGTCAATTTGGCCGGTCTGCCGGCTCTGAGTCTTCCCTGTGGTTTTGATGCCCAGGGACTCCCCATCGGGATGC
AACTGATCGGCAATGTTCTCCGAGAGGATCTCTTACTTCAGGTGGCCCATGTCTATGAACAGGCAACGGCTTGGCACCAG
AAGCAACCCCAACTGTAA

Upstream 100 bases:

>100_bases
TTCCGAGGCGATCGCCGCAAAAATAATTTTTTAGAGATGATTGTCAGGGAGGAAGGCAAGTGGATAAACTGATTGGGGTA
TTTCAGAGAATATATAAAGC

Downstream 100 bases:

>100_bases
GCAGTATTCACACATCGATAAATAATTTACCGTCTCATCTTTAGCTCACGTTAAAGCTCCCCCTCGAAAAAACTGCAGGG
GGATTTTTTATGCCGTAGCA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit A

Products: NA

Alternate protein names: Glu-ADT subunit A

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSAIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCT
KGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAA
GEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVD
IPQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETISCPRFRYGLPAYYIIAPSEASANL
ARYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRRIMLGTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAKVDVLIC
PTSPSTAFKAGEKTDDPLSMYLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQATAWHQ
KQPQL

Sequences:

>Translated_485_residues
MSAIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCT
KGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAA
GEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVD
IPQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETISCPRFRYGLPAYYIIAPSEASANL
ARYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRRIMLGTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAKVDVLIC
PTSPSTAFKAGEKTDDPLSMYLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQATAWHQ
KQPQL
>Mature_484_residues
SAIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCTK
GIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAG
EAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVDI
PQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETISCPRFRYGLPAYYIIAPSEASANLA
RYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRRIMLGTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAKVDVLICP
TSPSTAFKAGEKTDDPLSMYLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQATAWHQK
QPQL

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family

Homologues:

Organism=Homo sapiens, GI222831590, Length=473, Percent_Identity=40.3805496828753, Blast_Score=327, Evalue=2e-89,
Organism=Homo sapiens, GI195972892, Length=487, Percent_Identity=26.4887063655031, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI166795287, Length=170, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17543272, Length=444, Percent_Identity=38.963963963964, Blast_Score=282, Evalue=3e-76,
Organism=Caenorhabditis elegans, GI17537465, Length=492, Percent_Identity=26.8292682926829, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17556264, Length=309, Percent_Identity=31.7152103559871, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71990152, Length=242, Percent_Identity=32.6446280991736, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17556276, Length=259, Percent_Identity=31.2741312741313, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17556278, Length=259, Percent_Identity=31.2741312741313, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538252, Length=167, Percent_Identity=31.1377245508982, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17538254, Length=239, Percent_Identity=28.4518828451883, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323950, Length=458, Percent_Identity=35.589519650655, Blast_Score=252, Evalue=9e-68,
Organism=Saccharomyces cerevisiae, GI6319685, Length=464, Percent_Identity=32.3275862068966, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6320448, Length=232, Percent_Identity=32.3275862068966, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24648113, Length=454, Percent_Identity=43.1718061674009, Blast_Score=316, Evalue=3e-86,
Organism=Drosophila melanogaster, GI24652985, Length=504, Percent_Identity=27.3809523809524, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI19922090, Length=504, Percent_Identity=27.3809523809524, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24652981, Length=504, Percent_Identity=27.3809523809524, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24652983, Length=504, Percent_Identity=27.3809523809524, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24644968, Length=499, Percent_Identity=25.8517034068136, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24648435, Length=476, Percent_Identity=23.9495798319328, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24648437, Length=476, Percent_Identity=23.9495798319328, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45550774, Length=476, Percent_Identity=23.9495798319328, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI161078093, Length=518, Percent_Identity=25.6756756756757, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21356731, Length=493, Percent_Identity=24.7464503042596, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24648441, Length=431, Percent_Identity=23.6658932714617, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24648439, Length=431, Percent_Identity=23.6658932714617, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATA_SYNP2 (B1XJG8)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734284.1
- ProteinModelPortal:   B1XJG8
- SMR:   B1XJG8
- GeneID:   6057623
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1025
- HOGENOM:   HBG481888
- OMA:   RWGLIAF
- ProtClustDB:   PRK00012
- GO:   GO:0006412
- HAMAP:   MF_00120
- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412
- Gene3D:   G3DSA:3.90.1300.10
- PANTHER:   PTHR11895
- TIGRFAMs:   TIGR00132

Pfam domain/function: PF01425 Amidase; SSF75304 Amidase_sig_enz

EC number: 6.3.5.-

Molecular weight: Translated: 51792; Mature: 51660

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00571 AMIDASES

Important sites: ACT_SITE 75-75 ACT_SITE 150-150 ACT_SITE 174-174

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GETIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNL
CCEEHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCC
DEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPAS
HHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHH
LCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
IPQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETISCPR
CHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
FRYGLPAYYIIAPSEASANLARYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRRIML
EECCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEE
GTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAKVDVLICPTSPSTAFKAGEKTDDPLSM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCHHHH
YLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQATAWHQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQPQL
CCCCC
>Mature Secondary Structure 
SAIRTLHQQLIAKERSAVEILTETFAHIEAVEPKVKAFLTLTKEQALAQAAQVDAKIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GETIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVPTYESTVTQELQEAGAIMVGKTNL
CCEEHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCC
DEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPAS
HHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHH
LCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
IPQYSQLLQPELPKDKPLKIGIIQETFGEGLDPEVAEAVQKAIAQLQELGAEVETISCPR
CHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
FRYGLPAYYIIAPSEASANLARYDAVKYGTRNAAADNLVDMYTQTRAAGFGPEVKRRIML
EECCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEE
GTYTLSAGYYDAYYLKAQKVRTLIKKDFDQAFAKVDVLICPTSPSTAFKAGEKTDDPLSM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCHHHH
YLSDLMTIPVNLAGLPALSLPCGFDAQGLPIGMQLIGNVLREDLLLQVAHVYEQATAWHQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQPQL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA