| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077642
Identifier: 170077642
GI number: 170077642
Start: 1059243
End: 1060379
Strand: Direct
Name: 170077642
Synonym: SYNPCC7002_A1021
Alternate gene names: NA
Gene position: 1059243-1060379 (Clockwise)
Preceding gene: 170077640
Following gene: 170077646
Centisome position: 35.21
GC content: 50.75
Gene sequence:
>1137_bases ATGTTGAGAATTTTAAGGGTATTTTCACTATTAGATCGCTACATTATGGCGCAACTTGTGGGGCCTTTCCTATTTGGGTT AGGAATTTTCACGAGTTTGGGCCTCACCATCGGCGTTCTCTTTGAGGTAATGCGCAACGTGGTCGCCAATGAAATCACCT GGGCGATCGCCTTCCAAATTCTCGCTCTCCGTCTCCCAGAATTTCTCGTCCTCGGCCTCCCTATGGCAACCCTACTGGGT ACCCTCACCGCCTACAGCAGCCTATCTTCCTTTAGTGAAATTATCGCCTTACGGAGCGTTGGTTTGCCCCCCTTGCGGCT GATGTTGCCCGGTCTGCTTTTGGGGTTACTGATCACGGGCATCACCTTTGGCCTCAACGATTGGATTGTCCCCCAGACCA CGAAACAAGCCAGCACCATTGCCAACATTGCTCAGGGCGAAGCAACCATTGACTACCAAGAAAAAAATATCATCTACCCC GAATATCAACGGGTAAAAACGGCCACTGGTAACCGCGAAATCCTCAAAACCCTCTTTTATGCCGAGACCTTCGATGGCAC CCAAATGAACAATCTCACCATCCTCGATCGAGCCGCCGTCGATACCCAAAGAATTATCACCGCCGCCGCCGCCCAGTGGA ATGCCAATGAACAGGGTTGGCTGGTGCAGGATGGCAGTATTTATCAAATTGGGGCCAATGGTTCCTTTAGTGACATCGAG CAGTTTGAAACCAACTTTTTAAATCTGTCTGATGCCCCTTTGATCCTCGCCACCCGCTGTCAACGCCCAAATGAAATGAC CCTCCAGGTGATTGATGTTTGTTTAGAGAGCCTCAAGTTAAGTCGTAATGAAAGGCGGATCCGGACGCTCCAGGTGAGAA AACAAGAAAAATTTTCCGTCCCCTTCGTTTGTATTGTCTTTGCGATGGTCGGCTCGGCCATTGGCCTGCGCCCGCAAAAC TCAAGCCGAGCGACCAGTGTTGGCCTATCGGTGGCCATCGTTTTTGCCTACTATCTCATTTCTGTGATTTCCAGCTCCAT GGGAGTCTGGGGAACGATTACGCCGTTTATGGGGACGTGGTTTCCTAATCTATTGGGGTTAGTGGCCGCAGGGACAATTC TCTGGCGGACAGGCTAG
Upstream 100 bases:
>100_bases CAATTTCAGACAAAACAGTAACTTCTTTGGCATGATGGGCTAGGGATTTTAATTGCTAAACAGTTGCTAAAACTCTCCAC TCTAATCAGACTAGACCACA
Downstream 100 bases:
>100_bases GCAATATTGTCACAAACAAAAAAGAGGTAGGTTTATCCCCTACCTCCAAAACGTTTTACTGAAAAGAATCAGTCTATGAC CAGACCCAGGGTTTTAACCT
Product: YjgP/YjgQ permease superfamily
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG
Sequences:
>Translated_378_residues MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG >Mature_378_residues MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41704; Mature: 41704
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALRLPEFLVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFY HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH AETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHH QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSV HHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PFVCIVFAMVGSAIGLRPQNSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH FPNLLGLVAAGTILWRTG HHHHHHHHHHHHHEEECC >Mature Secondary Structure MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALRLPEFLVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFY HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH AETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHH QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSV HHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PFVCIVFAMVGSAIGLRPQNSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH FPNLLGLVAAGTILWRTG HHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA