Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077642

Identifier: 170077642

GI number: 170077642

Start: 1059243

End: 1060379

Strand: Direct

Name: 170077642

Synonym: SYNPCC7002_A1021

Alternate gene names: NA

Gene position: 1059243-1060379 (Clockwise)

Preceding gene: 170077640

Following gene: 170077646

Centisome position: 35.21

GC content: 50.75

Gene sequence:

>1137_bases
ATGTTGAGAATTTTAAGGGTATTTTCACTATTAGATCGCTACATTATGGCGCAACTTGTGGGGCCTTTCCTATTTGGGTT
AGGAATTTTCACGAGTTTGGGCCTCACCATCGGCGTTCTCTTTGAGGTAATGCGCAACGTGGTCGCCAATGAAATCACCT
GGGCGATCGCCTTCCAAATTCTCGCTCTCCGTCTCCCAGAATTTCTCGTCCTCGGCCTCCCTATGGCAACCCTACTGGGT
ACCCTCACCGCCTACAGCAGCCTATCTTCCTTTAGTGAAATTATCGCCTTACGGAGCGTTGGTTTGCCCCCCTTGCGGCT
GATGTTGCCCGGTCTGCTTTTGGGGTTACTGATCACGGGCATCACCTTTGGCCTCAACGATTGGATTGTCCCCCAGACCA
CGAAACAAGCCAGCACCATTGCCAACATTGCTCAGGGCGAAGCAACCATTGACTACCAAGAAAAAAATATCATCTACCCC
GAATATCAACGGGTAAAAACGGCCACTGGTAACCGCGAAATCCTCAAAACCCTCTTTTATGCCGAGACCTTCGATGGCAC
CCAAATGAACAATCTCACCATCCTCGATCGAGCCGCCGTCGATACCCAAAGAATTATCACCGCCGCCGCCGCCCAGTGGA
ATGCCAATGAACAGGGTTGGCTGGTGCAGGATGGCAGTATTTATCAAATTGGGGCCAATGGTTCCTTTAGTGACATCGAG
CAGTTTGAAACCAACTTTTTAAATCTGTCTGATGCCCCTTTGATCCTCGCCACCCGCTGTCAACGCCCAAATGAAATGAC
CCTCCAGGTGATTGATGTTTGTTTAGAGAGCCTCAAGTTAAGTCGTAATGAAAGGCGGATCCGGACGCTCCAGGTGAGAA
AACAAGAAAAATTTTCCGTCCCCTTCGTTTGTATTGTCTTTGCGATGGTCGGCTCGGCCATTGGCCTGCGCCCGCAAAAC
TCAAGCCGAGCGACCAGTGTTGGCCTATCGGTGGCCATCGTTTTTGCCTACTATCTCATTTCTGTGATTTCCAGCTCCAT
GGGAGTCTGGGGAACGATTACGCCGTTTATGGGGACGTGGTTTCCTAATCTATTGGGGTTAGTGGCCGCAGGGACAATTC
TCTGGCGGACAGGCTAG

Upstream 100 bases:

>100_bases
CAATTTCAGACAAAACAGTAACTTCTTTGGCATGATGGGCTAGGGATTTTAATTGCTAAACAGTTGCTAAAACTCTCCAC
TCTAATCAGACTAGACCACA

Downstream 100 bases:

>100_bases
GCAATATTGTCACAAACAAAAAAGAGGTAGGTTTATCCCCTACCTCCAAAACGTTTTACTGAAAAGAATCAGTCTATGAC
CAGACCCAGGGTTTTAACCT

Product: YjgP/YjgQ permease superfamily

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG
TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP
EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE
QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN
SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG

Sequences:

>Translated_378_residues
MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG
TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP
EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE
QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN
SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG
>Mature_378_residues
MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFLVLGLPMATLLG
TLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYP
EYQRVKTATGNREILKTLFYAETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE
QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAMVGSAIGLRPQN
SSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLVAAGTILWRTG

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41704; Mature: 41704

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALRLPEFLVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFY
HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH
AETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE
HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHH
QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSV
HHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PFVCIVFAMVGSAIGLRPQNSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTW
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
FPNLLGLVAAGTILWRTG
HHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MLRILRVFSLLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALRLPEFLVLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITFGLNDWIVPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFY
HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHH
AETFDGTQMNNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIE
HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCHHHHH
QFETNFLNLSDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSV
HHHHHHCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PFVCIVFAMVGSAIGLRPQNSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTW
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
FPNLLGLVAAGTILWRTG
HHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA