| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077641
Identifier: 170077641
GI number: 170077641
Start: 1057556
End: 1059031
Strand: Reverse
Name: 170077641
Synonym: SYNPCC7002_A1020
Alternate gene names: NA
Gene position: 1059031-1057556 (Counterclockwise)
Preceding gene: 170077643
Following gene: 170077639
Centisome position: 35.21
GC content: 54.34
Gene sequence:
>1476_bases ATGTTTGACCTGTTTGCTTCTTTGCTCATTGCCCAGGAATCTGCCCCTTTATTGGTGGCCCAAGAGAACAGGTCGAAGGA AGAGTTACTCCCCCACCAAGTACCACAACCAGGGGAGGATCAGGGGTCTTCTGTGGGGCGATCGCCGGCGGCCATCGTGA CGGAACCCCAAGAGGTGCGCCCTTTGCCGGGGAGTCTCAATGAAATTCCCGTCTTTAACAGCAACAGCCCTGAAGTCATT GCCCAGGAAGGCATCTTATTATCGACCTTCCCAAAGGCAGGAAAAAGCCAGGCGATCGCCCACCTCGAAACCCCCCTCGA AGGACGCTTTGATATTTTTACCCACCACATTTCCCGTCCCGCCACGGAGCAGCGCACCCTGTACCAAGGCTTGTTGGTCA ACAATCCGACTGGAAGCCCCCGCACCCTCAAAATTCTCCAAGGCATTAGTTACCTCAATAGTAAAGATGCCCCCTTCCGC GAACTATTACCCTTCGTTGAGGATCCCCAGGGTCATGTCTATTCCGGCCCTGGCTCCCGACTGGTGAGCGATACCCTCCG GGGCAAAAGCCAAACGCAATTCCCAGAGATTCTACGTATTCCCCCCTACAGCACCGTGGTTTTGGCGAATCTCCCCATCC CGGTTAGCGGTGCTCGCTCTACCTACTTACAAGTGGAAACGGATGGTAGCGTTTACTTGGCAAATTTAGCGAAATATGAA GTCCGCGAAGAAATTGCCACCAGCAGTATTAGCAATAATGGCAGTATTGTCGAAGGGAAAGCTGTCCGCTCCCGTCCCCC CAGCCTCAATGAATGGCGATCGCTCCTCACCCAAGGTCAGCTTGTAGAACCCCGGGATCTGCCCCCAGTTCCCAGTAAAG ATCCTGGTCGCATTATTTATGGCCGGGTTGCAGGTATTTCCGTCGGTAGTCAGTGGGAAGCCACCGTCACTGATCCAGAC GCAGAGAGTTTAGCAATCCCCGCCCCCGGCGAAGCGATTTCTTTCCCCATTAGCACCACCAGCACTGGCACCTTTGGCAC CGACCAAGTCCAAAGCGCCCCCATGCTCACCCGTTACCCTGATACCGCGCTCCAGGGCCATGGTAACTATTTAGTCCACT ACAAACTGACTTTCCCCCTTGAAAATACGAGCGATGAATATCAGTGGACGTCGCTAACGTTTCAAACGCCGATTAAGGAT GATCTCCATAGCGATCGCCTTTCCTTTTTTGAATCGCCCCCCAACCGTGTTTTCTATCGAGGCACTGTCCGCATCAACTA TCCCAACGAATACCGACGCCAGATTACCCGCTATGTCCACCTAGTACAACATCGGGGCCAACGCTCAGAACCCCTTGCCA CCCTGGAAATTCCCCCTGGCACAAGTCGCACCGCCGAAATTGACTTTTTCTATCCCCCCGACGCAACGCCTCCCCAGGTG ATTACCGTGAGGACTCTCGCCCCAGAGGAGCGTTAA
Upstream 100 bases:
>100_bases CACTGATTGATCACCGCGCGTCGGGAACTTAGAGCCGCGATAATGATTCAGTGCCACTGCACTTTGGTTTATTCTAAATT TACTTTTTTTGATAGAGTCC
Downstream 100 bases:
>100_bases ATATTGTTGAATATTCTCAAAAGAATGTAGTGATCGCCCTAGGCACGTTTCGGGGGAAACAGTTGCCCCAACGGTAAGCC CCAACAGGCAAAATCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MFDLFASLLIAQESAPLLVAQENRSKEELLPHQVPQPGEDQGSSVGRSPAAIVTEPQEVRPLPGSLNEIPVFNSNSPEVI AQEGILLSTFPKAGKSQAIAHLETPLEGRFDIFTHHISRPATEQRTLYQGLLVNNPTGSPRTLKILQGISYLNSKDAPFR ELLPFVEDPQGHVYSGPGSRLVSDTLRGKSQTQFPEILRIPPYSTVVLANLPIPVSGARSTYLQVETDGSVYLANLAKYE VREEIATSSISNNGSIVEGKAVRSRPPSLNEWRSLLTQGQLVEPRDLPPVPSKDPGRIIYGRVAGISVGSQWEATVTDPD AESLAIPAPGEAISFPISTTSTGTFGTDQVQSAPMLTRYPDTALQGHGNYLVHYKLTFPLENTSDEYQWTSLTFQTPIKD DLHSDRLSFFESPPNRVFYRGTVRINYPNEYRRQITRYVHLVQHRGQRSEPLATLEIPPGTSRTAEIDFFYPPDATPPQV ITVRTLAPEER
Sequences:
>Translated_491_residues MFDLFASLLIAQESAPLLVAQENRSKEELLPHQVPQPGEDQGSSVGRSPAAIVTEPQEVRPLPGSLNEIPVFNSNSPEVI AQEGILLSTFPKAGKSQAIAHLETPLEGRFDIFTHHISRPATEQRTLYQGLLVNNPTGSPRTLKILQGISYLNSKDAPFR ELLPFVEDPQGHVYSGPGSRLVSDTLRGKSQTQFPEILRIPPYSTVVLANLPIPVSGARSTYLQVETDGSVYLANLAKYE VREEIATSSISNNGSIVEGKAVRSRPPSLNEWRSLLTQGQLVEPRDLPPVPSKDPGRIIYGRVAGISVGSQWEATVTDPD AESLAIPAPGEAISFPISTTSTGTFGTDQVQSAPMLTRYPDTALQGHGNYLVHYKLTFPLENTSDEYQWTSLTFQTPIKD DLHSDRLSFFESPPNRVFYRGTVRINYPNEYRRQITRYVHLVQHRGQRSEPLATLEIPPGTSRTAEIDFFYPPDATPPQV ITVRTLAPEER >Mature_491_residues MFDLFASLLIAQESAPLLVAQENRSKEELLPHQVPQPGEDQGSSVGRSPAAIVTEPQEVRPLPGSLNEIPVFNSNSPEVI AQEGILLSTFPKAGKSQAIAHLETPLEGRFDIFTHHISRPATEQRTLYQGLLVNNPTGSPRTLKILQGISYLNSKDAPFR ELLPFVEDPQGHVYSGPGSRLVSDTLRGKSQTQFPEILRIPPYSTVVLANLPIPVSGARSTYLQVETDGSVYLANLAKYE VREEIATSSISNNGSIVEGKAVRSRPPSLNEWRSLLTQGQLVEPRDLPPVPSKDPGRIIYGRVAGISVGSQWEATVTDPD AESLAIPAPGEAISFPISTTSTGTFGTDQVQSAPMLTRYPDTALQGHGNYLVHYKLTFPLENTSDEYQWTSLTFQTPIKD DLHSDRLSFFESPPNRVFYRGTVRINYPNEYRRQITRYVHLVQHRGQRSEPLATLEIPPGTSRTAEIDFFYPPDATPPQV ITVRTLAPEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54223; Mature: 54223
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLFASLLIAQESAPLLVAQENRSKEELLPHQVPQPGEDQGSSVGRSPAAIVTEPQEVR CHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHCC PLPGSLNEIPVFNSNSPEVIAQEGILLSTFPKAGKSQAIAHLETPLEGRFDIFTHHISRP CCCCCCCCCCEECCCCCCEEEECCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCC ATEQRTLYQGLLVNNPTGSPRTLKILQGISYLNSKDAPFRELLPFVEDPQGHVYSGPGSR CHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHCCCCCCEECCCCCH LVSDTLRGKSQTQFPEILRIPPYSTVVLANLPIPVSGARSTYLQVETDGSVYLANLAKYE HHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHHH VREEIATSSISNNGSIVEGKAVRSRPPSLNEWRSLLTQGQLVEPRDLPPVPSKDPGRIIY HHHHHHHHCCCCCCCEEECCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE GRVAGISVGSQWEATVTDPDAESLAIPAPGEAISFPISTTSTGTFGTDQVQSAPMLTRYP EEEEEEEECCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCEEECC DTALQGHGNYLVHYKLTFPLENTSDEYQWTSLTFQTPIKDDLHSDRLSFFESPPNRVFYR CHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE GTVRINYPNEYRRQITRYVHLVQHRGQRSEPLATLEIPPGTSRTAEIDFFYPPDATPPQV EEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCE ITVRTLAPEER EEEEECCCCCC >Mature Secondary Structure MFDLFASLLIAQESAPLLVAQENRSKEELLPHQVPQPGEDQGSSVGRSPAAIVTEPQEVR CHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHCC PLPGSLNEIPVFNSNSPEVIAQEGILLSTFPKAGKSQAIAHLETPLEGRFDIFTHHISRP CCCCCCCCCCEECCCCCCEEEECCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCC ATEQRTLYQGLLVNNPTGSPRTLKILQGISYLNSKDAPFRELLPFVEDPQGHVYSGPGSR CHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHCCCCCCEECCCCCH LVSDTLRGKSQTQFPEILRIPPYSTVVLANLPIPVSGARSTYLQVETDGSVYLANLAKYE HHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHHH VREEIATSSISNNGSIVEGKAVRSRPPSLNEWRSLLTQGQLVEPRDLPPVPSKDPGRIIY HHHHHHHHCCCCCCCEEECCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE GRVAGISVGSQWEATVTDPDAESLAIPAPGEAISFPISTTSTGTFGTDQVQSAPMLTRYP EEEEEEEECCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHCCCCCEEECC DTALQGHGNYLVHYKLTFPLENTSDEYQWTSLTFQTPIKDDLHSDRLSFFESPPNRVFYR CHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEE GTVRINYPNEYRRQITRYVHLVQHRGQRSEPLATLEIPPGTSRTAEIDFFYPPDATPPQV EEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCE ITVRTLAPEER EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA