Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is tkt [H]

Identifier: 170077643

GI number: 170077643

Start: 1060473

End: 1062479

Strand: Reverse

Name: tkt [H]

Synonym: SYNPCC7002_A1022

Alternate gene names: 170077643

Gene position: 1062479-1060473 (Counterclockwise)

Preceding gene: 170077644

Following gene: 170077641

Centisome position: 35.32

GC content: 52.91

Gene sequence:

>2007_bases
ATGACCGTTGCAACCCAATCTATAGATCAGCTTTGTATTAATGCAATTCGCTTTTTAGCAATTGATGGCGTCGAGAAGGC
AAAATCTGGTCACCCCGGTTTACCGATGGGCGCCGCTCCCATGGCCTACACCCTCTGGGACAAATTTATGCGGTTCAACC
CCAAAAATCCGAAATGGGTTAACCGCGATCGCTTTGTTTTGTCAGCGGGTCACGGTTCGATGCTGCAGTATGCCTTGATG
TACTTGGCTGGCTATGACAGTGTTTCCCTCGAAGACATCAAGCAATTTCGTCAATGGAAATCGAAGACCCCTGGTCACCC
TGAAAACTTCGAGACCCCTGGTGTAGAAGTTACGACTGGCCCCCTCGGCCAAGGGATCGCCAATGCCGTCGGCCTCGCCC
TCGCGGAAGCACACCTCGCAGCCCGCTACAACAAGCCCGATGCCAAAATTTTTGACCATTACACCTATGTGATTATGGGT
GATGGTTGCAACATGGAAGGAATCTCCGGGGAAGCGGCATCCATTGCGGGTCACTGGGGTCTGGGCAAATTAATTGCCCT
CTACGACGATAACCATATTTCCATCGACGGCTCCACGGACATTGCTTTCACTGAAGATGTGTGTAAGCGCTATGAGTCCT
ACGGTTGGCACGTGCTCCATGTCGAAGATGGCAACAATGACATTGAGGCGATCGCCAAAGCCATTGAAGCGGCTAAGGCA
GTGACTGACAAGCCCTCTTTGATCAAAATCACAACGACCATTGGTTACGGTTCCCCCAACAAAGCAGATACCGCTGGGGT
ACACGGGGCAGCCCTTGGTGCCGACGAAATTGAACTGACCCGTAAATCCCTCGAATGGAACTATGGGCCTTTTGAAGTGC
CTGAAGATGCCCTCAACCATTTCCGGAAAGCCGTTGAACGGGGTGCCAGCGCCGAAGCAGAGTGGGACCAAGTATGGGCC
ACCTACAAAACAAAATATGCCGAGGAGGCTGCAGAATTAGAGCGGATTCTTTCTGGGAAGCCCCCCGCAAACTGGGCTGA
CGCTTTACCCACCGCAACGCCCGCCGATAAAGGTCTTGCGACCCGTAAGCACTCCGAAGTAACCCTGAATGCGATCGCCC
CGGTATTACCAGAATTGATCGGTGGTTCTGCGGACTTGACTCACTCCAACCTGACAGAAATCCACGTTTCTGGCGATTTC
CAAAAAGGTGCCTACGAAAACCGCAACGTCCACTTCGGCGTCCGGGAACATGCCATGGGCGCGATCTGTAATGGCATCGC
CCTCCACGGTACAGGTTTAATCCCTTACGGAGCCACTTTCCTTGTGTTCTCCGACTACATGCGAAATTCCATCCGTTTAT
CGGCCCTGTCCGAAGCACGGGTCATTTGGGTAATGACCCACGACTCCATTGCCCTTGGAGAAGACGGCCCCACCCACCAA
CCGATCGAGCATGTTGCTTCTCTGCGGGCGATGCCGAACCTCTATGTTTATCGTCCGGCAGATACCAACGAAACCTCCGG
TGCCTATAAAGTTGCTGTGGAAAGTGCGACAACGCCGACCCTCTTAGCCCTCACCCGTCAAGGTCTCCCCAACCTCGAAG
GCAGTTCCATCGAAAATGCGGAAAAAGGTGGCTACATCCTTTCCGATAGCGAAGGCACCCCTGATCTGATTTTGATTGGT
ACAGGGAGTGAAGTGCAGCTTTGTGTCGAAGCAGCAAAAGCACTCCGGGCAAACGGCAAAAATGTCCGTGTTGTTTCCAT
GCCCTGTGTGGAACGCTTTGAAGAGCAAGATGCCGCTTACCAAGAGTCCGTACTGCCGAAAGCTGTAACCAAACGGGTTG
CCGTGGAGGCTGGTGCCACCATGAGCTGGTACAAGTACGTTGGCTTTGAAGGCGCTGTCATCGGTATTGACACCTACGGT
GCTTCCGCTCCTGGTGGTGTGGTCATGGAGAAATTTGGTTTCACCGTGGACAACGTTGTTAAAACCGCTGAGACAGTACT
AGGTTAA

Upstream 100 bases:

>100_bases
GATGGGGGGGATTTTGAGGAGGGCAATTTGCGCTTCTTGATGGTCTAACAACTCCCTATAGTTTTTCTTTATTTGTCGTT
TACTGTCAGAAATTTTCACT

Downstream 100 bases:

>100_bases
AACCCTGGGTCTGGTCATAGACTGATTCTTTTCAGTAAAACGTTTTGGAGGTAGGGGATAAACCTACCTCTTTTTTGTTT
GTGACAATATTGCCTAGCCT

Product: transketolase

Products: NA

Alternate protein names: TK [H]

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALM
YLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMG
DGCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA
VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWA
TYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDF
QKGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ
PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIG
TGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYG
ASAPGGVVMEKFGFTVDNVVKTAETVLG

Sequences:

>Translated_668_residues
MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALM
YLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMG
DGCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA
VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWA
TYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDF
QKGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ
PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIG
TGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYG
ASAPGGVVMEKFGFTVDNVVKTAETVLG
>Mature_667_residues
TVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWVNRDRFVLSAGHGSMLQYALMY
LAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGD
GCNMEGISGEAASIAGHWGLGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKAV
TDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNHFRKAVERGASAEAEWDQVWAT
YKTKYAEEAAELERILSGKPPANWADALPTATPADKGLATRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQ
KGAYENRNVHFGVREHAMGAICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQP
IEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENAEKGGYILSDSEGTPDLILIGT
GSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAYQESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGA
SAPGGVVMEKFGFTVDNVVKTAETVLG

Specific function: Unknown

COG id: COG0021

COG function: function code G; Transketolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transketolase family [H]

Homologues:

Organism=Homo sapiens, GI205277463, Length=578, Percent_Identity=26.1245674740484, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI4507521, Length=578, Percent_Identity=26.1245674740484, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI133778974, Length=576, Percent_Identity=26.5625, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI225637459, Length=588, Percent_Identity=22.6190476190476, Blast_Score=110, Evalue=6e-24,
Organism=Homo sapiens, GI225637463, Length=512, Percent_Identity=23.6328125, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI225637461, Length=512, Percent_Identity=23.6328125, Blast_Score=107, Evalue=5e-23,
Organism=Escherichia coli, GI48994911, Length=662, Percent_Identity=54.0785498489426, Blast_Score=692, Evalue=0.0,
Organism=Escherichia coli, GI1788808, Length=663, Percent_Identity=52.790346907994, Blast_Score=677, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17539652, Length=594, Percent_Identity=26.5993265993266, Blast_Score=144, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6325331, Length=667, Percent_Identity=54.7226386806597, Blast_Score=701, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319593, Length=670, Percent_Identity=51.1940298507463, Blast_Score=660, Evalue=0.0,
Organism=Drosophila melanogaster, GI45551847, Length=676, Percent_Identity=26.0355029585799, Blast_Score=169, Evalue=9e-42,
Organism=Drosophila melanogaster, GI45550715, Length=676, Percent_Identity=26.0355029585799, Blast_Score=169, Evalue=9e-42,
Organism=Drosophila melanogaster, GI24645119, Length=648, Percent_Identity=25.9259259259259, Blast_Score=156, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24666278, Length=678, Percent_Identity=26.2536873156342, Blast_Score=152, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005475
- InterPro:   IPR005478
- InterPro:   IPR020826
- InterPro:   IPR005476
- InterPro:   IPR005474 [H]

Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]

EC number: =2.2.1.1 [H]

Molecular weight: Translated: 71994; Mature: 71863

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWV
CCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE
NRDRFVLSAGHGSMLQYALMYLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTG
CCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
PLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGDGCNMEGISGEAASIAGHWG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHEECCCC
LGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA
CCEEEEEEECCEEEECCCCCEEECHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNH
HCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FRKAVERGASAEAEWDQVWATYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC
TRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQKGAYENRNVHFGVREHAMG
CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHH
AICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ
HHHCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEECCCCCCCH
PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENA
HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCC
EKGGYILSDSEGTPDLILIGTGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAY
CCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
QESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGASAPGGVVMEKFGFTVDNVV
HHHHCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHH
KTAETVLG
HHHHHHCC
>Mature Secondary Structure 
TVATQSIDQLCINAIRFLAIDGVEKAKSGHPGLPMGAAPMAYTLWDKFMRFNPKNPKWV
CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE
NRDRFVLSAGHGSMLQYALMYLAGYDSVSLEDIKQFRQWKSKTPGHPENFETPGVEVTTG
CCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
PLGQGIANAVGLALAEAHLAARYNKPDAKIFDHYTYVIMGDGCNMEGISGEAASIAGHWG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHEECCCC
LGKLIALYDDNHISIDGSTDIAFTEDVCKRYESYGWHVLHVEDGNNDIEAIAKAIEAAKA
CCEEEEEEECCEEEECCCCCEEECHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH
VTDKPSLIKITTTIGYGSPNKADTAGVHGAALGADEIELTRKSLEWNYGPFEVPEDALNH
HCCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FRKAVERGASAEAEWDQVWATYKTKYAEEAAELERILSGKPPANWADALPTATPADKGLA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC
TRKHSEVTLNAIAPVLPELIGGSADLTHSNLTEIHVSGDFQKGAYENRNVHFGVREHAMG
CCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHH
AICNGIALHGTGLIPYGATFLVFSDYMRNSIRLSALSEARVIWVMTHDSIALGEDGPTHQ
HHHCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEECCCCCCCH
PIEHVASLRAMPNLYVYRPADTNETSGAYKVAVESATTPTLLALTRQGLPNLEGSSIENA
HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCC
EKGGYILSDSEGTPDLILIGTGSEVQLCVEAAKALRANGKNVRVVSMPCVERFEEQDAAY
CCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
QESVLPKAVTKRVAVEAGATMSWYKYVGFEGAVIGIDTYGASAPGGVVMEKFGFTVDNVV
HHHHCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHH
KTAETVLG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]