| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077633
Identifier: 170077633
GI number: 170077633
Start: 1044129
End: 1044533
Strand: Reverse
Name: 170077633
Synonym: SYNPCC7002_A1012
Alternate gene names: NA
Gene position: 1044533-1044129 (Counterclockwise)
Preceding gene: 170077636
Following gene: 170077632
Centisome position: 34.72
GC content: 49.88
Gene sequence:
>405_bases ATGACTTCTGCTTCTCCGTCCCCTCAGCTCAGCGATCAACTGCCGCCAACGGTGGAATTACGGCCTAGCTATAATATTCC CCTGGTGCTGATTATTAGTGGGATTCCCCTGGCCCTCTGGCAAATTTGGGTGGGGGCGATCGCCTCGTTATTTGGCCTAT TTTTACTGTTTCAAGCAGTAATCCTGCGACTAGAATTCACCGCCACGGATTTAGATGTTTATCGCAGCGGCGATCGCATT CGGCGTTTCCCCTATCGCGAATGGCAAAATTGGCGCATCTTTTGGACAAGGGTTCCCATCCTGTTTTACTTTAAAGAAAT CAATAGCATTCATTTTTTACCGATTATTTTTGACCCCCGCACCCTCCAGCAGGTTCTCGAAGCGCGCTGCCCCCGCCAAG ACTAA
Upstream 100 bases:
>100_bases TTTGTTTTTGTACTTCAAATCAGAAAATCTTTAATGGGGAAAGGCTTGGCGTTAAAATTGGAATTTACCCCTGCTCACCC TAAAACCCCCACAGCAAGCA
Downstream 100 bases:
>100_bases CACCCTTCATTAATGACGCTTTCCCCTGCGTTGTCACCCGTTGCCCCTAAGGACAAACTTTTATGAGTTCAGACCCCCAA CAAGACCGACCCAAATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTSASPSPQLSDQLPPTVELRPSYNIPLVLIISGIPLALWQIWVGAIASLFGLFLLFQAVILRLEFTATDLDVYRSGDRI RRFPYREWQNWRIFWTRVPILFYFKEINSIHFLPIIFDPRTLQQVLEARCPRQD
Sequences:
>Translated_134_residues MTSASPSPQLSDQLPPTVELRPSYNIPLVLIISGIPLALWQIWVGAIASLFGLFLLFQAVILRLEFTATDLDVYRSGDRI RRFPYREWQNWRIFWTRVPILFYFKEINSIHFLPIIFDPRTLQQVLEARCPRQD >Mature_133_residues TSASPSPQLSDQLPPTVELRPSYNIPLVLIISGIPLALWQIWVGAIASLFGLFLLFQAVILRLEFTATDLDVYRSGDRIR RFPYREWQNWRIFWTRVPILFYFKEINSIHFLPIIFDPRTLQQVLEARCPRQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15748; Mature: 15616
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSASPSPQLSDQLPPTVELRPSYNIPLVLIISGIPLALWQIWVGAIASLFGLFLLFQAV CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ILRLEFTATDLDVYRSGDRIRRFPYREWQNWRIFWTRVPILFYFKEINSIHFLPIIFDPR HHHHHCCCCCHHHHHCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEEEECCH TLQQVLEARCPRQD HHHHHHHHCCCCCC >Mature Secondary Structure TSASPSPQLSDQLPPTVELRPSYNIPLVLIISGIPLALWQIWVGAIASLFGLFLLFQAV CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ILRLEFTATDLDVYRSGDRIRRFPYREWQNWRIFWTRVPILFYFKEINSIHFLPIIFDPR HHHHHCCCCCHHHHHCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEEEECCH TLQQVLEARCPRQD HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA