| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077632
Identifier: 170077632
GI number: 170077632
Start: 1042942
End: 1044066
Strand: Reverse
Name: 170077632
Synonym: SYNPCC7002_A1011
Alternate gene names: NA
Gene position: 1044066-1042942 (Counterclockwise)
Preceding gene: 170077633
Following gene: 170077631
Centisome position: 34.71
GC content: 52.53
Gene sequence:
>1125_bases ATGAGTTCAGACCCCCAACAAGACCGACCCAAATTAGATCTGCAACCCACTCCCAAAGAACCATTAAATTTGCCCTCTGA AGCGAGTGGTACCGAGCCTGATGCCAGTGCTTCAACTCCTGCGCCTGACCAGACCCCAGAGACCACGACAGACAGCACGG ACTTAGAAAAATTACAGGCAGAGAAAGCAGCGCTTCTGGCAGAGATTGCCGAACTTAAGGCAGAAAAAGAGGCTCTTTTA CAAACGGAAACGGGAGATCTCCAAGTTCAACTGGAACGGTTGATGGCCACAGGACTCCAAACCCTCGAAGACAGACAGGC AAGCCTGCAAAAATCTGTTGCCCAATTGGAGCGACGCCGGGACAAAATCCGTGAGGAAATGCGCACCACCTTTGCGGGTA CGTCCCAAGAAATTGCCGTGCGGGTGCAAGGGTTTAAGGACTATCTCATCGGGAGCTTGCAGGATTTGGCGATCGCCGCC GAGCAGTTAGACTTACCCAGCTTTGATCAAGATTGGTCTGCGGCACCGTCACCAGTACCAACCCCGGAGCCTCCTCCTCA AAAATTAACTCCACCCCAGTTTTCGGAGCAAAGTTTTGCAGCTAAGGCGCGTCGAATCCAGGAAATGCTGGATCAATACC GGATGTCGCCGGACTACTATGGCCCCCCTTGGCAACTGCGTCGCACCTTTGAGCCGATCCATAGCGAACGGGTGAAGAAA TGGTTCTTTGACCAAGGCGGACGGGGCGCGATCCGAAGCATGGGTAGCCGTCTGCAAAATATTCTTGTGGCTTCGGCCAG TTTATCGGTGCTCTACAGTCTCTATGGCGATCGCCTCCGGGCCTTGATTTTGGCTAATACCCCAGAACGACTCGGCGAAT GGCGGCGGGGCTTACAGGACTGTTTAGGCATCTCCCGCAGTGACTTCGGGCCAAACTCTGGGGTCATTTTATTTGAAAGT CCCGATGCCCTCGTCCAAAAGGCGGATCGACTCGTAGAAGATGATAGACTACCGCTAATCATTATTGATGAGGCTGAGGA CAATATTAATCTGTCGTTGCTGCAATACCCGTTGTGGCTTGCATTTGCGCCGGAACCCCAGTCCGATTCTTCTTACTTTT TCTAA
Upstream 100 bases:
>100_bases AGCAGGTTCTCGAAGCGCGCTGCCCCCGCCAAGACTAACACCCTTCATTAATGACGCTTTCCCCTGCGTTGTCACCCGTT GCCCCTAAGGACAAACTTTT
Downstream 100 bases:
>100_bases GTTTTCGCACGTGTTTTCTGCATCGGAGTAATGGGTTATGAATCTTTCGTTGGCGATCGCCCCCTTTTGCATCGGAGTAG CCTATTTATTGGGCGCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSSDPQQDRPKLDLQPTPKEPLNLPSEASGTEPDASASTPAPDQTPETTTDSTDLEKLQAEKAALLAEIAELKAEKEALL QTETGDLQVQLERLMATGLQTLEDRQASLQKSVAQLERRRDKIREEMRTTFAGTSQEIAVRVQGFKDYLIGSLQDLAIAA EQLDLPSFDQDWSAAPSPVPTPEPPPQKLTPPQFSEQSFAAKARRIQEMLDQYRMSPDYYGPPWQLRRTFEPIHSERVKK WFFDQGGRGAIRSMGSRLQNILVASASLSVLYSLYGDRLRALILANTPERLGEWRRGLQDCLGISRSDFGPNSGVILFES PDALVQKADRLVEDDRLPLIIIDEAEDNINLSLLQYPLWLAFAPEPQSDSSYFF
Sequences:
>Translated_374_residues MSSDPQQDRPKLDLQPTPKEPLNLPSEASGTEPDASASTPAPDQTPETTTDSTDLEKLQAEKAALLAEIAELKAEKEALL QTETGDLQVQLERLMATGLQTLEDRQASLQKSVAQLERRRDKIREEMRTTFAGTSQEIAVRVQGFKDYLIGSLQDLAIAA EQLDLPSFDQDWSAAPSPVPTPEPPPQKLTPPQFSEQSFAAKARRIQEMLDQYRMSPDYYGPPWQLRRTFEPIHSERVKK WFFDQGGRGAIRSMGSRLQNILVASASLSVLYSLYGDRLRALILANTPERLGEWRRGLQDCLGISRSDFGPNSGVILFES PDALVQKADRLVEDDRLPLIIIDEAEDNINLSLLQYPLWLAFAPEPQSDSSYFF >Mature_373_residues SSDPQQDRPKLDLQPTPKEPLNLPSEASGTEPDASASTPAPDQTPETTTDSTDLEKLQAEKAALLAEIAELKAEKEALLQ TETGDLQVQLERLMATGLQTLEDRQASLQKSVAQLERRRDKIREEMRTTFAGTSQEIAVRVQGFKDYLIGSLQDLAIAAE QLDLPSFDQDWSAAPSPVPTPEPPPQKLTPPQFSEQSFAAKARRIQEMLDQYRMSPDYYGPPWQLRRTFEPIHSERVKKW FFDQGGRGAIRSMGSRLQNILVASASLSVLYSLYGDRLRALILANTPERLGEWRRGLQDCLGISRSDFGPNSGVILFESP DALVQKADRLVEDDRLPLIIIDEAEDNINLSLLQYPLWLAFAPEPQSDSSYFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41871; Mature: 41740
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDPQQDRPKLDLQPTPKEPLNLPSEASGTEPDASASTPAPDQTPETTTDSTDLEKLQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EKAALLAEIAELKAEKEALLQTETGDLQVQLERLMATGLQTLEDRQASLQKSVAQLERRR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIREEMRTTFAGTSQEIAVRVQGFKDYLIGSLQDLAIAAEQLDLPSFDQDWSAAPSPVP HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TPEPPPQKLTPPQFSEQSFAAKARRIQEMLDQYRMSPDYYGPPWQLRRTFEPIHSERVKK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WFFDQGGRGAIRSMGSRLQNILVASASLSVLYSLYGDRLRALILANTPERLGEWRRGLQD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH CLGISRSDFGPNSGVILFESPDALVQKADRLVEDDRLPLIIIDEAEDNINLSLLQYPLWL HHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCEEE AFAPEPQSDSSYFF EECCCCCCCCCCCC >Mature Secondary Structure SSDPQQDRPKLDLQPTPKEPLNLPSEASGTEPDASASTPAPDQTPETTTDSTDLEKLQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EKAALLAEIAELKAEKEALLQTETGDLQVQLERLMATGLQTLEDRQASLQKSVAQLERRR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIREEMRTTFAGTSQEIAVRVQGFKDYLIGSLQDLAIAAEQLDLPSFDQDWSAAPSPVP HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TPEPPPQKLTPPQFSEQSFAAKARRIQEMLDQYRMSPDYYGPPWQLRRTFEPIHSERVKK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WFFDQGGRGAIRSMGSRLQNILVASASLSVLYSLYGDRLRALILANTPERLGEWRRGLQD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH CLGISRSDFGPNSGVILFESPDALVQKADRLVEDDRLPLIIIDEAEDNINLSLLQYPLWL HHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCEEE AFAPEPQSDSSYFF EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA