| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is plsY [H]
Identifier: 170077631
GI number: 170077631
Start: 1042257
End: 1042904
Strand: Reverse
Name: plsY [H]
Synonym: SYNPCC7002_A1010
Alternate gene names: 170077631
Gene position: 1042904-1042257 (Counterclockwise)
Preceding gene: 170077632
Following gene: 170077628
Centisome position: 34.67
GC content: 51.54
Gene sequence:
>648_bases ATGAATCTTTCGTTGGCGATCGCCCCCTTTTGCATCGGAGTAGCCTATTTATTGGGCGCTATTCCCACGGGCTACCTAGC TGGCAAGTGGCTCAAGGGAATTGATATCCGCGATTATGGTTCCCGTTCCACAGGGGCGACCAACGTCCTCAGAACCCTCG GTAAAAAAGCGGGGATCACGGTGTTGCTCTTCGATGCGCTCAAGGGCGTTGCGGCGATCTTATTTTTTAAGCTGCTTTAT ACCCACCCCGAATGGATCGCTTTTCCTGCCAACTATGACCAATACTGGCTCACCATGGCCGTGGCGATCGCCGCTGTCTT GGGCCACAGCAAATCGATTTTCATCGGCTTTAACGGCGGCAAATCCGTTGCTACCAGCATCGGCGTCCTTTTGATTATGG CTCCTTGGGTGGCCCTGGGCACCATCGTCACCTTTGCAGCGGCAATTACTTTAACCCAAATCGTTTCCCTGAGTTCAATC AGTGGGGCGATCGCCGTGATGCTTTTGATGATTGTTTTACAGCAGCCCCTCCCCTACATTCTCTTTGGGGCGATCGCTGG TATTTATGTCATTGTGCGCCATCGCAGTAATATCCAAAGAATCATCGCTGGTACCGAACCTAAAATTGGCGCAAAGGCAA CAAACTAA
Upstream 100 bases:
>100_bases CAATACCCGTTGTGGCTTGCATTTGCGCCGGAACCCCAGTCCGATTCTTCTTACTTTTTCTAAGTTTTCGCACGTGTTTT CTGCATCGGAGTAATGGGTT
Downstream 100 bases:
>100_bases ACTTTAAAATTAGTGCTCAACAGATAAAGTTTCTCCTTGAAAATAGGGAGAAGATTTTCTGTACTTTTGATTAATTTATC CGGCCTGATTTACTTGGAAA
Product: membrane protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN
Sequences:
>Translated_215_residues MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN >Mature_215_residues MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
Organism=Escherichia coli, GI1789439, Length=210, Percent_Identity=35.2380952380952, Blast_Score=94, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 22808; Mature: 22808
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGIT CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCH VLLFDALKGVAAILFFKLLYTHPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGG HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC KSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSISGAIAVMLLMIVLQQPLPYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGIT CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCH VLLFDALKGVAAILFFKLLYTHPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGG HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC KSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSISGAIAVMLLMIVLQQPLPYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA