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The map label for this gene is yycF [H]

Identifier: 170077600

GI number: 170077600

Start: 1007779

End: 1008507

Strand: Direct

Name: yycF [H]

Synonym: SYNPCC7002_A0979

Alternate gene names: 170077600

Gene position: 1007779-1008507 (Clockwise)

Preceding gene: 170077598

Following gene: 170077601

Centisome position: 33.5

GC content: 51.3

Gene sequence:

>729_bases
TTGGAAAATCATAAAGAAAGAATTCTTGTCGTTGACGACGAAGCCAGCATCCGCCGCATCCTCGAAACCCGCCTTTCCAT
GATTGGTTACGAGGTTGTGACCGCCGCTGATGGTGAAGAAGCCCTCGCCACATTTGATGAAGCAGACCCCGATCTTGTGG
TTCTTGATGTGATGATGCCCAAGCTCGATGGCTATGGCGTTTGCCAAGAACTCCGCAAAGAATCCGATGTGCCGATTATT
ATGCTCACAGCCCTTGGGGATGTGGCGGACCGCATCACAGGTTTGGAGCTTGGGGCCGATGATTACGTCGTAAAACCATT
CTCCCCCAAAGAACTAGAAGCGCGCATTCGTTCAGTCCTGCGGCGTGTTGAAAAAAATGGTGGTACGGGCATTCCTAGCT
CCGGGGTTATCCATGTGGGTTCGATCCGCATTGATACCAATAAGCGCCAGGTCTACAAAGGCGATGAACGCATTCGACTA
ACAGGGATGGAGTTTAGCCTGTTGGAATTACTGGTCAGCCGTTCTGGGGAACCCTTTTCTCGTTCAGAAATCCTCCAAGA
AGTTTGGGGCTACACCCCAGAGCGCCATGTGGATACCCGCGTTGTGGATGTGCATATTTCCCGGCTGCGCGCCAAACTAG
AAGATGATCCCAGCAATCCCGAACTTATTTTGACAGCCAGAGGTACAGGTTATCTGTTTCAGCGGATCCTCGAACCGGGT
GATGAATAA

Upstream 100 bases:

>100_bases
TCCCATCAGATTTCAGGAAAGCGATATTCTTATATCTAGATAACCCTACTTAATAAACTTCAACAACACTTACCGAAAGT
CAACAGGAGCGTGAAGGAAC

Downstream 100 bases:

>100_bases
CCCCAAGAATTGTACGGATAAACTTTTAAGATCATGGTTGGGATGAATGTTTGACCGTGGTCTTAAATTTTGACTGGGGA
TGCTAGATCTGACGCAAGGT

Product: two-component DNA binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MENHKERILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADPDLVVLDVMMPKLDGYGVCQELRKESDVPII
MLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVEKNGGTGIPSSGVIHVGSIRIDTNKRQVYKGDERIRL
TGMEFSLLELLVSRSGEPFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
DE

Sequences:

>Translated_242_residues
MENHKERILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADPDLVVLDVMMPKLDGYGVCQELRKESDVPII
MLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVEKNGGTGIPSSGVIHVGSIRIDTNKRQVYKGDERIRL
TGMEFSLLELLVSRSGEPFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
DE
>Mature_242_residues
MENHKERILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADPDLVVLDVMMPKLDGYGVCQELRKESDVPII
MLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVEKNGGTGIPSSGVIHVGSIRIDTNKRQVYKGDERIRL
TGMEFSLLELLVSRSGEPFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
DE

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=43.8297872340426, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=40.8695652173913, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=37.9912663755458, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=40.0881057268723, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=35.8407079646018, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI2367329, Length=235, Percent_Identity=41.2765957446808, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=34.6153846153846, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1790860, Length=233, Percent_Identity=38.1974248927039, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=35.4700854700855, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787375, Length=229, Percent_Identity=33.1877729257642, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=32.8947368421053, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=34.9557522123894, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=34.9137931034483, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=32.15859030837, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=39.6551724137931, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787487, Length=102, Percent_Identity=34.3137254901961, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788191, Length=127, Percent_Identity=31.496062992126, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI145693157, Length=126, Percent_Identity=34.1269841269841, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27117; Mature: 27117

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENHKERILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADPDLVVLDVMMP
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCEEEEEEHHC
KLDGYGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCEECCCCEEECCCCCHHHHHHHHHHH
RRVEKNGGTGIPSSGVIHVGSIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFS
HHHHHCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEECCCHHHHHHHHHCCCCCCC
RSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCC
DE
CC
>Mature Secondary Structure
MENHKERILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADPDLVVLDVMMP
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCEEEEEEHHC
KLDGYGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCEECCCCEEECCCCCHHHHHHHHHHH
RRVEKNGGTGIPSSGVIHVGSIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFS
HHHHHCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEECCCHHHHHHHHHCCCCCCC
RSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]