| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077598
Identifier: 170077598
GI number: 170077598
Start: 1005160
End: 1005930
Strand: Direct
Name: 170077598
Synonym: SYNPCC7002_A0977
Alternate gene names: NA
Gene position: 1005160-1005930 (Clockwise)
Preceding gene: 170077597
Following gene: 170077600
Centisome position: 33.42
GC content: 37.35
Gene sequence:
>771_bases ATGAGTGAATTTTGGCTTTGGTTCTTTGCCATCATTGGGATTATCTCCTGTGTATTGGCCTTGTTGCTGATTCTTGCCTC GTTGATGCCTCCTGAAACTGAATCCCCTTCAGATGAAAAAATTGCTCAAAAGCAAAAAGAGGCACTAGATACAATTGAAA TCCTCGGACGGCAAGGTGATGAAAAATTTGCCGCAAGAGATTGGCAAGCAGCGATTTCAATTTATAAAAGAGTTATTGAA CTTTGTCGCAACGTTGAACTGAAAGAAGTAGAGAAAACTTCGTATGATCTTTGCGGCATCAGCGCGATGCATTTGGGGAA TTTTGAAGTTGCAATCTTCTATTTTTCTAAAGGTACTAAAGAAGATGCATATCTGTATAATCGTGCAATCGCTCATTACT CTTTTGACAATTATTTAGAGTGCATAGAAGATTGCATTCAAGTATCTCGTGAAAATGGAAGCTATGCCCCATCGTTTTGG TTAAGAGGACTAGCACGCCTAGAAATAGGAGACAGAACGATGGCAATTAATGATTTTAAGAAAGCTGTTGAGCTAGACAA AAAACATGGAAATGATTACGGCGAAGATCATCATAGCTACTATTTTCGTGCTTTAGCCTACATATTTGTTAATCAGAAAC AAAAAGCAAAGCTAGATATAGAACAAGCTCTAAAATGGGCAGGTGAAGTCAAAGATACTTTCTACGAAGCAAAAATACAT GAATTACAGAAAAAATTAAACTCTCAAGTACTACGAGGAGACAGTAAATGA
Upstream 100 bases:
>100_bases GGTGAATAACCTTAGTCTGGAAGCCACCAAAGTTAGCCATATTTACACTTAGAGGAATGATGAGGATATAGTCAAATAAA AAACTTGTTATGTAGATCCT
Downstream 100 bases:
>100_bases CTTTGTCAACTGAAATTTTGATTGTGCTAACTGACAATTGTGTGGATTGATTTTATGGAAACCCAAACTTTAGATATTGT GATGGGCATCTTGGCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSEFWLWFFAIIGIISCVLALLLILASLMPPETESPSDEKIAQKQKEALDTIEILGRQGDEKFAARDWQAAISIYKRVIE LCRNVELKEVEKTSYDLCGISAMHLGNFEVAIFYFSKGTKEDAYLYNRAIAHYSFDNYLECIEDCIQVSRENGSYAPSFW LRGLARLEIGDRTMAINDFKKAVELDKKHGNDYGEDHHSYYFRALAYIFVNQKQKAKLDIEQALKWAGEVKDTFYEAKIH ELQKKLNSQVLRGDSK
Sequences:
>Translated_256_residues MSEFWLWFFAIIGIISCVLALLLILASLMPPETESPSDEKIAQKQKEALDTIEILGRQGDEKFAARDWQAAISIYKRVIE LCRNVELKEVEKTSYDLCGISAMHLGNFEVAIFYFSKGTKEDAYLYNRAIAHYSFDNYLECIEDCIQVSRENGSYAPSFW LRGLARLEIGDRTMAINDFKKAVELDKKHGNDYGEDHHSYYFRALAYIFVNQKQKAKLDIEQALKWAGEVKDTFYEAKIH ELQKKLNSQVLRGDSK >Mature_255_residues SEFWLWFFAIIGIISCVLALLLILASLMPPETESPSDEKIAQKQKEALDTIEILGRQGDEKFAARDWQAAISIYKRVIEL CRNVELKEVEKTSYDLCGISAMHLGNFEVAIFYFSKGTKEDAYLYNRAIAHYSFDNYLECIEDCIQVSRENGSYAPSFWL RGLARLEIGDRTMAINDFKKAVELDKKHGNDYGEDHHSYYFRALAYIFVNQKQKAKLDIEQALKWAGEVKDTFYEAKIHE LQKKLNSQVLRGDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29537; Mature: 29406
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFWLWFFAIIGIISCVLALLLILASLMPPETESPSDEKIAQKQKEALDTIEILGRQGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EKFAARDWQAAISIYKRVIELCRNVELKEVEKTSYDLCGISAMHLGNFEVAIFYFSKGTK HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCEEEEEEEECCCCC EDAYLYNRAIAHYSFDNYLECIEDCIQVSRENGSYAPSFWLRGLARLEIGDRTMAINDFK CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCHHHHHHHH KAVELDKKHGNDYGEDHHSYYFRALAYIFVNQKQKAKLDIEQALKWAGEVKDTFYEAKIH HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH ELQKKLNSQVLRGDSK HHHHHHHHHHHCCCCC >Mature Secondary Structure SEFWLWFFAIIGIISCVLALLLILASLMPPETESPSDEKIAQKQKEALDTIEILGRQGD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EKFAARDWQAAISIYKRVIELCRNVELKEVEKTSYDLCGISAMHLGNFEVAIFYFSKGTK HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEECCEEEEEEEECCCCC EDAYLYNRAIAHYSFDNYLECIEDCIQVSRENGSYAPSFWLRGLARLEIGDRTMAINDFK CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCHHHHHHHH KAVELDKKHGNDYGEDHHSYYFRALAYIFVNQKQKAKLDIEQALKWAGEVKDTFYEAKIH HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH ELQKKLNSQVLRGDSK HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA