| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is wzb [C]
Identifier: 170077594
GI number: 170077594
Start: 1001397
End: 1001870
Strand: Direct
Name: wzb [C]
Synonym: SYNPCC7002_A0973
Alternate gene names: 170077594
Gene position: 1001397-1001870 (Clockwise)
Preceding gene: 170077592
Following gene: 170077595
Centisome position: 33.29
GC content: 48.95
Gene sequence:
>474_bases ATGGCCTATAAATTATTATTCGTTTGCCTCGGTAACATCTGCCGTTCCCCCTCCGCCGAAAATATTATGCGGCATCTTTT GGAGCAAGAAGGTTTAAGCAATAAAATTCTCTGCGATTCGGCCGGGACTTCTAGCTATCACATAGGAGCCGCCCCAGACC GACGGATGCAGGCAGCGGCCCAAAAGCGCGATATTCGTCTGATGGGTAGCGCCCGGCAATTTTCCCGCGCTGATTTTGAA GCATTTGACCTGATCCTGGCAATGGATCGCGCTAATTATCGTGACATTTTGTCCCTAGACCGGGCGGATATCTATGGCGA AAAAGTTAAAATGATGTGTGACTACGCCACGAATTTTCCCGATAGCGAAGTGCCAGATCCCTACTACGGCGGCCAATCGG GTTTTGACTATGTGATTGATTTGCTCCTCGATGCCTGCCAAGGACTCCTCACAGAAATTAAACAGGAAATGTGA
Upstream 100 bases:
>100_bases GGGAGATGGCCCATTTGTCATGGGGAATTTGTGCTTTTCCGGGAAGGAATTTGGGGTACACTGCAAAATTGCGATCGCCC CTTAGCTAAAAAAAATTGAG
Downstream 100 bases:
>100_bases TGGTGTAGGCAGTTTATTTTCTCGGTCACACCATGTTTATCCGCAATGCAACGGCGATCGCCTTATTGGGCCTCTTTTGG TTCCAGGGGGCAGCTAGTAA
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAYKLLFVCLGNICRSPSAENIMRHLLEQEGLSNKILCDSAGTSSYHIGAAPDRRMQAAAQKRDIRLMGSARQFSRADFE AFDLILAMDRANYRDILSLDRADIYGEKVKMMCDYATNFPDSEVPDPYYGGQSGFDYVIDLLLDACQGLLTEIKQEM
Sequences:
>Translated_157_residues MAYKLLFVCLGNICRSPSAENIMRHLLEQEGLSNKILCDSAGTSSYHIGAAPDRRMQAAAQKRDIRLMGSARQFSRADFE AFDLILAMDRANYRDILSLDRADIYGEKVKMMCDYATNFPDSEVPDPYYGGQSGFDYVIDLLLDACQGLLTEIKQEM >Mature_156_residues AYKLLFVCLGNICRSPSAENIMRHLLEQEGLSNKILCDSAGTSSYHIGAAPDRRMQAAAQKRDIRLMGSARQFSRADFEA FDLILAMDRANYRDILSLDRADIYGEKVKMMCDYATNFPDSEVPDPYYGGQSGFDYVIDLLLDACQGLLTEIKQEM
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI4757714, Length=149, Percent_Identity=38.255033557047, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI6005988, Length=149, Percent_Identity=34.8993288590604, Blast_Score=100, Evalue=6e-22, Organism=Homo sapiens, GI96304457, Length=76, Percent_Identity=44.7368421052632, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325330, Length=138, Percent_Identity=34.7826086956522, Blast_Score=94, Evalue=1e-20, Organism=Drosophila melanogaster, GI78711846, Length=156, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI78706770, Length=160, Percent_Identity=35.625, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI78706772, Length=160, Percent_Identity=35.625, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI78706766, Length=155, Percent_Identity=33.5483870967742, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI78706768, Length=155, Percent_Identity=33.5483870967742, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI78706764, Length=131, Percent_Identity=35.1145038167939, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24648069, Length=94, Percent_Identity=38.2978723404255, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 17666; Mature: 17535
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKLLFVCLGNICRSPSAENIMRHLLEQEGLSNKILCDSAGTSSYHIGAAPDRRMQAAA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCHHHHHHHH QKRDIRLMGSARQFSRADFEAFDLILAMDRANYRDILSLDRADIYGEKVKMMCDYATNFP HHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSEVPDPYYGGQSGFDYVIDLLLDACQGLLTEIKQEM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AYKLLFVCLGNICRSPSAENIMRHLLEQEGLSNKILCDSAGTSSYHIGAAPDRRMQAAA CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCHHHHHHHH QKRDIRLMGSARQFSRADFEAFDLILAMDRANYRDILSLDRADIYGEKVKMMCDYATNFP HHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DSEVPDPYYGGQSGFDYVIDLLLDACQGLLTEIKQEM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]