| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077592
Identifier: 170077592
GI number: 170077592
Start: 998899
End: 999888
Strand: Direct
Name: 170077592
Synonym: SYNPCC7002_A0971
Alternate gene names: NA
Gene position: 998899-999888 (Clockwise)
Preceding gene: 170077589
Following gene: 170077594
Centisome position: 33.21
GC content: 51.21
Gene sequence:
>990_bases ATGACGAAAAAGGTCTTTATCACTGGCGCTAGTGGCTGCATTGGCCATTACCTTGCTGAAACGTTTATTTACCACACCGA TTACGAGCTTTATCTGTTGGTGCGATCGCCCCAGAAATTGCGCTTCAACACCGAGGCCCGGGGCGGCATTCATGTGGTTC AGGGGGATTTATTAGATATCGAACAGCAGGCAGATCTCCTAAAAACGATCAACGTGGCGATCTTGGCGGCCACAGCCTGG GGTGGTGCCCAAGAATCCTTTGAGACCAACGTGGTAAAAACAGCCCAGCTTATTGATCTGCTCGATCCAGAAATTTGTGA ACAGGTGATTTATTTTTCCACGGCGAGTATTCTGGGGCGCAACAATGAAGTGCTCACGGAGGCCCGGGACTTTGGCACCG ACTACATCCGCACGAAATACGAGTGTTACCAAAAACTGGGCACCTTAAAATTAGCACCGAAAATTTCCGTGGTTTTCCCC ACCCTGGTGGCGGGGGGCGGTGAAAATAAACCCTTTTCCCACCTGTCTGGGGGCCTGCGGGATCACATTAAATGGCTATC CATCGCCAAGTTCCTCAGTGCGGACGGCAGTTTCCACTTTATCCATGGGGAAGATATTGCGCGGGTGGTGCGCCATCTGG CAGAAAATCCGCCGACCATTCGCTTTGATCTACCCCCCGGAGAATTAGACCCCGATCGCCAGTTTGTGTTGGGCAATGAA CCGTTAACCGCCGACGCGGCGATCGCCGAATTGTGTGAGCACATGGGCCAAAAAATTTACTTTAAAATTCCCCTGTCCCT GTGGTTGGCGAATTTCATTATCAAAGTTTTTCGGATTCAGTTGGCGGCCTGGGATCGCTTTTGCATCGACTACCGCCATT TCACCTATCGCAAAACCTACAATCCCCGCAGCTTTGGCTTAGAATCTGCCTGTCCAAAACTCAGTGATGTCCTCACTAGC TCCGGGATTATCCCACGTCGTCGCCCTTAA
Upstream 100 bases:
>100_bases GATCGACGGGGAGCAGGGGTAGGCTCGGTCAAAATTTTTCGGGACAGGCCCCCACATACTAAACTAAGGGGCAACTTTCC ATCGCGCATCCCGCCCACCC
Downstream 100 bases:
>100_bases TCGAGGAAGAAATTTTCCGGGATAATCTGCATCTTTGGCAAATTGGCGATCGCCCCGTAGAGTTGCTCGGCCATCACCTC ATTTGCAGCAGCATTAATGT
Product: NAD-dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTKKVFITGASGCIGHYLAETFIYHTDYELYLLVRSPQKLRFNTEARGGIHVVQGDLLDIEQQADLLKTINVAILAATAW GGAQESFETNVVKTAQLIDLLDPEICEQVIYFSTASILGRNNEVLTEARDFGTDYIRTKYECYQKLGTLKLAPKISVVFP TLVAGGGENKPFSHLSGGLRDHIKWLSIAKFLSADGSFHFIHGEDIARVVRHLAENPPTIRFDLPPGELDPDRQFVLGNE PLTADAAIAELCEHMGQKIYFKIPLSLWLANFIIKVFRIQLAAWDRFCIDYRHFTYRKTYNPRSFGLESACPKLSDVLTS SGIIPRRRP
Sequences:
>Translated_329_residues MTKKVFITGASGCIGHYLAETFIYHTDYELYLLVRSPQKLRFNTEARGGIHVVQGDLLDIEQQADLLKTINVAILAATAW GGAQESFETNVVKTAQLIDLLDPEICEQVIYFSTASILGRNNEVLTEARDFGTDYIRTKYECYQKLGTLKLAPKISVVFP TLVAGGGENKPFSHLSGGLRDHIKWLSIAKFLSADGSFHFIHGEDIARVVRHLAENPPTIRFDLPPGELDPDRQFVLGNE PLTADAAIAELCEHMGQKIYFKIPLSLWLANFIIKVFRIQLAAWDRFCIDYRHFTYRKTYNPRSFGLESACPKLSDVLTS SGIIPRRRP >Mature_328_residues TKKVFITGASGCIGHYLAETFIYHTDYELYLLVRSPQKLRFNTEARGGIHVVQGDLLDIEQQADLLKTINVAILAATAWG GAQESFETNVVKTAQLIDLLDPEICEQVIYFSTASILGRNNEVLTEARDFGTDYIRTKYECYQKLGTLKLAPKISVVFPT LVAGGGENKPFSHLSGGLRDHIKWLSIAKFLSADGSFHFIHGEDIARVVRHLAENPPTIRFDLPPGELDPDRQFVLGNEP LTADAAIAELCEHMGQKIYFKIPLSLWLANFIIKVFRIQLAAWDRFCIDYRHFTYRKTYNPRSFGLESACPKLSDVLTSS GIIPRRRP
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37023; Mature: 36892
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKVFITGASGCIGHYLAETFIYHTDYELYLLVRSPQKLRFNTEARGGIHVVQGDLLDI CCCEEEEECCCHHHHHHHHHHHEEECCCEEEEEEECCCCEEECCCCCCCEEEEECCHHCH EQQADLLKTINVAILAATAWGGAQESFETNVVKTAQLIDLLDPEICEQVIYFSTASILGR HHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NNEVLTEARDFGTDYIRTKYECYQKLGTLKLAPKISVVFPTLVAGGGENKPFSHLSGGLR CCHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEHHHHCCCCCCCCHHHHCCCHH DHIKWLSIAKFLSADGSFHFIHGEDIARVVRHLAENPPTIRFDLPPGELDPDRQFVLGNE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCC PLTADAAIAELCEHMGQKIYFKIPLSLWLANFIIKVFRIQLAAWDRFCIDYRHFTYRKTY CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NPRSFGLESACPKLSDVLTSSGIIPRRRP CCHHCCHHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TKKVFITGASGCIGHYLAETFIYHTDYELYLLVRSPQKLRFNTEARGGIHVVQGDLLDI CCEEEEECCCHHHHHHHHHHHEEECCCEEEEEEECCCCEEECCCCCCCEEEEECCHHCH EQQADLLKTINVAILAATAWGGAQESFETNVVKTAQLIDLLDPEICEQVIYFSTASILGR HHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC NNEVLTEARDFGTDYIRTKYECYQKLGTLKLAPKISVVFPTLVAGGGENKPFSHLSGGLR CCHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEHHHHCCCCCCCCHHHHCCCHH DHIKWLSIAKFLSADGSFHFIHGEDIARVVRHLAENPPTIRFDLPPGELDPDRQFVLGNE HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCC PLTADAAIAELCEHMGQKIYFKIPLSLWLANFIIKVFRIQLAAWDRFCIDYRHFTYRKTY CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NPRSFGLESACPKLSDVLTSSGIIPRRRP CCHHCCHHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA