| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hflX [H]
Identifier: 170077566
GI number: 170077566
Start: 974542
End: 976146
Strand: Direct
Name: hflX [H]
Synonym: SYNPCC7002_A0944
Alternate gene names: 170077566
Gene position: 974542-976146 (Clockwise)
Preceding gene: 170077565
Following gene: 170077567
Centisome position: 32.4
GC content: 55.45
Gene sequence:
>1605_bases GTGCCCGGCGATCGCCTCACGACTCCAGAATTAGCCCAACGGATCGCGGCCCTCAGTACAGAGCTAAACCAAGCGGTTTG TGTTTATCTCAATCGCCGGGGCAAGGTGATCCGGGTGGGGGTTGGTTCGCCCCAACAAACCCAAATTCCCCCCCTAGAAT TACCCCGTTATGGTGCCGAGCGCTTATCGGGTATCCGCTGCTTAACCGCCAGCCCGAAGGATGAACCGCCCAAGGAATCG AGTTTAACGTCGATGGTGCTGCAACGGTTAGACGCCCTGGTGAGTTTTACGTTAACGGGGACGGGGACGACCAAACGGGG CCGGGGGGCCGCTGGCTACGTAAAAAATGTCTATGTGGCTCACCTCTTGCCCCAGACCCATCCGAGCCATGCCTATTGGC TTGTTTCTGAGTCTCAAGCCCTAGAAGAGGTTTCCCAACAGGATTTTTTGGATCTGGTTGAAGGACTAGAGGCGGAGTTT CGCCGGGAATTCACGGCCCAACAAGTCGATCAAAGCCATGACCGGGTGATTCTCGTCGGCTTACAAACATCAGATATTGG CGATCGCCCTTTCCAAGATCGTTTGACGGAACTGGCCCGCTTGGTGGATACTGCCGGGGGGGAAGTGCTGCTCACCCTGG AGCAAAAACGCAGCACGCCCCATCCCCAAACCGTTGTCGGTACCGGGAAAGTAGAAGAAATTGCCCTCCAGGTACAAACC CTTGGCGCGAATCTTGTGGTCTTTGACCGGGATCTATCTCCCGCCCAGGGGCGCAACCTGGAACGACAACTAGGGGTGAA GGTTTGCGATCGCACGGAAGTAATCCTCGATATTTTTGCTCAGCGGGCCCAGTCTCGCGCCGGAAAACTCCAGGTGGAAC TGGCGCAATTGGAGTATCTCTTGCCACGCTTGGTGGGTCGGGGTCAAGCCATGTCCCGTTTGGGGGGGGGGATCGGCACC CGTGGCCCTGGGGAAACGAAATTAGAAACGGAGCGGCGCACGATCCAAAGTCGCCTCAGTCGCTTGCAAAAGGAAGTGGA TCAACTGCAAGCCCACCGTTCGCGGATGCGCAGTCAGCGGCAACGGCAGGATGTGCCCACTTTTGCAATTGTCGGCTATA CCAATGCGGGCAAATCGACCTTGATTAATGCCCTCACCAATGCTGAAGTGTATGCGGCGGATCAACTGTTCGCGACCCTC GATCCCACGACGCGGCGCTTGACCCTCACCGATGAAGCCTTTCAAACCCAGACGATTCTACTAACGGATACCGTTGGTTT TATCCATGAGTTGCCTCCGGCCCTGGTGGATGCGTTTCGGGCGACCCTCGAAGAAGTCACCGAAGCCGATGCATTGATCC ATGTGGTGGATCTGTCCCATCCTGCGTGGCAGCATCAGTTAGAATCCGTCGAAAAAATTCTAGGGGAAATGCCGATTATG CCAGCCCAAGCCCTATTGGTTTTTAATAAGCTGGATCAAGTTTCTAGTGAAGCACTCCAGGAGGCGAAGTTACGCCATCC GAACGCGGTTTATATTTCTGCCAGCGATCGCCTCGGTTTTGAAACCCTCCGACAACGGCTTGCCCAGATGCTAAAACAAC TATAA
Upstream 100 bases:
>100_bases ATTTCGTTCTAGGAAGCTGCCCATCGATACTATTCACGGTAATCTCAAAGGTCTTAAAAGTAGTCAACTCAAGCAGTTGC AACGACTGTATCAACAGGCT
Downstream 100 bases:
>100_bases AGAGACAAATTTTCGCGAGATTGTAAACCAATTGTCAAAAAACTGCGAATTTCTCCCTTAGCGTAGAACACAACTCGTTA AGCTTGAGATATGTCTACTA
Product: putative GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKES SLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEF RREFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGT RGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATL DPTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL
Sequences:
>Translated_534_residues MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKES SLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEF RREFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGT RGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATL DPTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL >Mature_533_residues PGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKESS LTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFR REFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQTL GANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGTR GPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLD PTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIMP AQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=241, Percent_Identity=36.9294605809129, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI310133116, Length=231, Percent_Identity=37.6623376623377, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310124269, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI310124267, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI310124171, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI310124169, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI1790615, Length=346, Percent_Identity=47.1098265895954, Blast_Score=285, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17561038, Length=315, Percent_Identity=30.1587301587302, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24650079, Length=367, Percent_Identity=32.425068119891, Blast_Score=132, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 59184; Mature: 59053
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAE CCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHH RLSGIRCLTASPKDEPPKESSLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVA HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHH HLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFRREFTAQQVDQSHDRVILVG HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT EECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHH LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYL CCCEEEEEECCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH LPRLVGRGQAMSRLGGGIGTRGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQR HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLDPTTRRLTLTDEAFQTQTIL HHHCCCCEEEEEECCCCHHHHHHHHHCCHHEEHHHHHEECCCCCEEEEEECHHHCCEEEE LTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCC PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAE CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHH RLSGIRCLTASPKDEPPKESSLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVA HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHH HLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFRREFTAQQVDQSHDRVILVG HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT EECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHH LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYL CCCEEEEEECCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH LPRLVGRGQAMSRLGGGIGTRGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQR HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLDPTTRRLTLTDEAFQTQTIL HHHCCCCEEEEEECCCCHHHHHHHHHCCHHEEHHHHHEECCCCCEEEEEECHHHCCEEEE LTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCC PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]