| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077567
Identifier: 170077567
GI number: 170077567
Start: 976266
End: 976706
Strand: Direct
Name: 170077567
Synonym: SYNPCC7002_A0945
Alternate gene names: NA
Gene position: 976266-976706 (Clockwise)
Preceding gene: 170077566
Following gene: 170077571
Centisome position: 32.46
GC content: 52.83
Gene sequence:
>441_bases GTGAATGCATCAGAACGGGCCTTAGGCGTTGAGCTGGCGACGAAAATTGCCTCGGTGGTGAATTTATTCCGGGCCGAATT CCCCGATGCAAGGGCCGACCTCAAACCCTGGCGCAATGACCCCGAAACCCGTGAATGGATGGACCCAGATTCCATTGACA TTGGCTTTCACCTGCCGGGCTGGAGTCCCCGTTTCCAAAGTCGGAGTATGCTGGTGCAAATTCGCTTTTTTACAGACCCC CTGGATCAAGTGCAAACCTTTATCGGCATTGAAACGGCGGGTTTTAATCACCAGGGGGAAGCTTGGCGGCTCTCAACCAT TGCCCAGTGGCAACTGGTCGGCGACTATCAACCCGCTAAAGATGTCTGCGATCGCCTCCAACGATTTTCCCAAAAAGCCT TTGAATTGTTCGCTTCAGGGAATTCTGATGCTGTCACCTAA
Upstream 100 bases:
>100_bases ATTGTAAACCAATTGTCAAAAAACTGCGAATTTCTCCCTTAGCGTAGAACACAACTCGTTAAGCTTGAGATATGTCTACT AGATTCCGAGGAGGTTAAAC
Downstream 100 bases:
>100_bases GGTTTCGAGGCACACTGTCTCGTTTCTAGCCACTGTTGCAAAATAATTTGGGCTGCCCGCTGATCGACGAGGCCCTTTTG TTGGCGGTCATATTGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNASERALGVELATKIASVVNLFRAEFPDARADLKPWRNDPETREWMDPDSIDIGFHLPGWSPRFQSRSMLVQIRFFTDP LDQVQTFIGIETAGFNHQGEAWRLSTIAQWQLVGDYQPAKDVCDRLQRFSQKAFELFASGNSDAVT
Sequences:
>Translated_146_residues MNASERALGVELATKIASVVNLFRAEFPDARADLKPWRNDPETREWMDPDSIDIGFHLPGWSPRFQSRSMLVQIRFFTDP LDQVQTFIGIETAGFNHQGEAWRLSTIAQWQLVGDYQPAKDVCDRLQRFSQKAFELFASGNSDAVT >Mature_146_residues MNASERALGVELATKIASVVNLFRAEFPDARADLKPWRNDPETREWMDPDSIDIGFHLPGWSPRFQSRSMLVQIRFFTDP LDQVQTFIGIETAGFNHQGEAWRLSTIAQWQLVGDYQPAKDVCDRLQRFSQKAFELFASGNSDAVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16636; Mature: 16636
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASERALGVELATKIASVVNLFRAEFPDARADLKPWRNDPETREWMDPDSIDIGFHLPG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC WSPRFQSRSMLVQIRFFTDPLDQVQTFIGIETAGFNHQGEAWRLSTIAQWQLVGDYQPAK CCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECHHEEEEEECCCCCHH DVCDRLQRFSQKAFELFASGNSDAVT HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNASERALGVELATKIASVVNLFRAEFPDARADLKPWRNDPETREWMDPDSIDIGFHLPG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC WSPRFQSRSMLVQIRFFTDPLDQVQTFIGIETAGFNHQGEAWRLSTIAQWQLVGDYQPAK CCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECHHEEEEEECCCCCHH DVCDRLQRFSQKAFELFASGNSDAVT HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA