Click here to switch to the map view.

The map label for this gene is psbN

Identifier: 170077431

GI number: 170077431

Start: 836362

End: 836493

Strand: Direct

Name: psbN

Synonym: SYNPCC7002_A0809

Alternate gene names: 170077431

Gene position: 836362-836493 (Clockwise)

Preceding gene: 170077429

Following gene: 170077434

Centisome position: 27.8

GC content: 46.97

Gene sequence:

>132_bases
ATGGATTCTGCAACAGTTCTTAGCATCGGCATTGCGGTGGTTGTGATCGCCGTAACAGGGTTTTCGATTTACACAGCCTT
CGGGCCTCCTTCGGTAGAACTTGAGGATCCCTTTGAAGATCATGAAGATTAA

Upstream 100 bases:

>100_bases
AACCGAGTACGCTGTGCCATAGGATTCGTGTATCGTAAAGGATTTTTGTAATGTTCCGTAATATTATAGAGGAAGAGTCA
TCATAAACTGAGATACACCT

Downstream 100 bases:

>100_bases
GCGGGCAGCTACCCTTTAACATCAAGCCCCATGGCTCTTATGCCTGGGTTGTTTTTCTCCCCAGTCTCGCTGTCATCATA
AAACCCTTTTTGAGATGTCT

Product: photosystem II reaction center N protein.-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MDSATVLSIGIAVVVIAVTGFSIYTAFGPPSVELEDPFEDHED

Sequences:

>Translated_43_residues
MDSATVLSIGIAVVVIAVTGFSIYTAFGPPSVELEDPFEDHED
>Mature_43_residues
MDSATVLSIGIAVVVIAVTGFSIYTAFGPPSVELEDPFEDHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_SYNP2 (B1XIE2)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734069.1
- GeneID:   6056645
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0809
- HOGENOM:   HBG710424
- ProtClustDB:   CLSK2404257
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 4540; Mature: 4540

Theoretical pI: Translated: 3.40; Mature: 3.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b5bd200)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSATVLSIGIAVVVIAVTGFSIYTAFGPPSVELEDPFEDHED
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MDSATVLSIGIAVVVIAVTGFSIYTAFGPPSVELEDPFEDHED
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA