| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077434
Identifier: 170077434
GI number: 170077434
Start: 838862
End: 839863
Strand: Direct
Name: 170077434
Synonym: SYNPCC7002_A0812
Alternate gene names: NA
Gene position: 838862-839863 (Clockwise)
Preceding gene: 170077431
Following gene: 170077435
Centisome position: 27.89
GC content: 55.59
Gene sequence:
>1002_bases ATGAATCAAGCCCCCCCTAACGCCGCAAATGCTAGCTTTCAGGCTGCTTTAGACAATTTAGACCTAGATCTAGACCGAGA ATTGCAACGTTATCGGCAACAGCGGCCACCATCCGAGCGATTCACACCGCCTCCAAGTCCAGAACCGCCCCTCGATGGGG GATCTGCAGCTCTTGATCAGGGTGATGATGGCGAATTAATGGCCCAACAACCAGCACAGGCTTCTGAAACAGACACTACC GAGACCATCACTGCCGTTGCTGGCCCCCTTTCCCCCTGGGAGCAGCCCACGCCCCCCCCGGAAGATTACCTGCAATCGTC GGAGGAACTCCTCAAAAGTTTAGATGCCAGCAGCCCACCTGTTACCCCGCCTACGCCACGTTGGAAACTGGGTCTTGCTT TTTTGGGAGCAGCCATTTTAGGGGGTGGATTGGTGGCCTTGGCGATCGCCGTTCCCGATTTATTTACCCCGACCCCAGCC CCGGAAACAGCCGCAGAATCCTCCCCTGCCCAGACCACGGCAACAACGCCAGAGACCACTACACCGGCGGCCTCTAGCAC CGTTAATCTAGCCTCCCAAGAATTTATCGAGTTGCGCCTAGACAATCTCAGCATCATTGATCCCAGCGTACCCACGGACA CCGAAAATACCGAAGCCGATGCCACTGCTTCTACCAGTGCCACAACGCCTCCCCCAACTCCAGATCAAGCAATAGCAACT CCCCTTGCGCCAGTGCCGGGCTTTCCGGGGACACCTTTGGCCACCCCCGATGGTTTGAAGTTGGGATATTACTACGTGAT TTTCCGGAATACGAGTCCCAACGCCCTGGATCGGGCTCAAGCAGTGGTTGATGGGGCTTTTGTGCGACAGTTCCCCGTGG GCCAAGCCATTCAGATGGCAGAAGTCGATTCAGCCGCCAAAGCCGATGATCTGATGCGTCAATTTAAGGCCCAAAAAATT GCAGCGGAGGTTTATTACCATCAACTGTCGCCAGCTTCCTAA
Upstream 100 bases:
>100_bases GAGTCTCCCAACCCCTTAGTTTGACAGTGGGGTTACTGAGCCGCGATCGCCTTTCCCCATCCCATTGATTGTTCTCCGTT GAGAGTGTAGGAGTTTTCGG
Downstream 100 bases:
>100_bases ACGAAGCGATCGCCCCCTGGGCTAGATTAGTAGTTGAAACGCGTCAGTAAGCGGGACACTGGGCACGATGAATTTTTTCC GGCGCACCTGGGATGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNQAPPNAANASFQAALDNLDLDLDRELQRYRQQRPPSERFTPPPSPEPPLDGGSAALDQGDDGELMAQQPAQASETDTT ETITAVAGPLSPWEQPTPPPEDYLQSSEELLKSLDASSPPVTPPTPRWKLGLAFLGAAILGGGLVALAIAVPDLFTPTPA PETAAESSPAQTTATTPETTTPAASSTVNLASQEFIELRLDNLSIIDPSVPTDTENTEADATASTSATTPPPTPDQAIAT PLAPVPGFPGTPLATPDGLKLGYYYVIFRNTSPNALDRAQAVVDGAFVRQFPVGQAIQMAEVDSAAKADDLMRQFKAQKI AAEVYYHQLSPAS
Sequences:
>Translated_333_residues MNQAPPNAANASFQAALDNLDLDLDRELQRYRQQRPPSERFTPPPSPEPPLDGGSAALDQGDDGELMAQQPAQASETDTT ETITAVAGPLSPWEQPTPPPEDYLQSSEELLKSLDASSPPVTPPTPRWKLGLAFLGAAILGGGLVALAIAVPDLFTPTPA PETAAESSPAQTTATTPETTTPAASSTVNLASQEFIELRLDNLSIIDPSVPTDTENTEADATASTSATTPPPTPDQAIAT PLAPVPGFPGTPLATPDGLKLGYYYVIFRNTSPNALDRAQAVVDGAFVRQFPVGQAIQMAEVDSAAKADDLMRQFKAQKI AAEVYYHQLSPAS >Mature_333_residues MNQAPPNAANASFQAALDNLDLDLDRELQRYRQQRPPSERFTPPPSPEPPLDGGSAALDQGDDGELMAQQPAQASETDTT ETITAVAGPLSPWEQPTPPPEDYLQSSEELLKSLDASSPPVTPPTPRWKLGLAFLGAAILGGGLVALAIAVPDLFTPTPA PETAAESSPAQTTATTPETTTPAASSTVNLASQEFIELRLDNLSIIDPSVPTDTENTEADATASTSATTPPPTPDQAIAT PLAPVPGFPGTPLATPDGLKLGYYYVIFRNTSPNALDRAQAVVDGAFVRQFPVGQAIQMAEVDSAAKADDLMRQFKAQKI AAEVYYHQLSPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34993; Mature: 34993
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAPPNAANASFQAALDNLDLDLDRELQRYRQQRPPSERFTPPPSPEPPLDGGSAALDQ CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GDDGELMAQQPAQASETDTTETITAVAGPLSPWEQPTPPPEDYLQSSEELLKSLDASSPP CCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC VTPPTPRWKLGLAFLGAAILGGGLVALAIAVPDLFTPTPAPETAAESSPAQTTATTPETT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC TPAASSTVNLASQEFIELRLDNLSIIDPSVPTDTENTEADATASTSATTPPPTPDQAIAT CCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC PLAPVPGFPGTPLATPDGLKLGYYYVIFRNTSPNALDRAQAVVDGAFVRQFPVGQAIQMA CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH EVDSAAKADDLMRQFKAQKIAAEVYYHQLSPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQAPPNAANASFQAALDNLDLDLDRELQRYRQQRPPSERFTPPPSPEPPLDGGSAALDQ CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GDDGELMAQQPAQASETDTTETITAVAGPLSPWEQPTPPPEDYLQSSEELLKSLDASSPP CCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC VTPPTPRWKLGLAFLGAAILGGGLVALAIAVPDLFTPTPAPETAAESSPAQTTATTPETT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC TPAASSTVNLASQEFIELRLDNLSIIDPSVPTDTENTEADATASTSATTPPPTPDQAIAT CCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC PLAPVPGFPGTPLATPDGLKLGYYYVIFRNTSPNALDRAQAVVDGAFVRQFPVGQAIQMA CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH EVDSAAKADDLMRQFKAQKIAAEVYYHQLSPAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA