| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077425
Identifier: 170077425
GI number: 170077425
Start: 829954
End: 830379
Strand: Direct
Name: 170077425
Synonym: SYNPCC7002_A0803
Alternate gene names: NA
Gene position: 829954-830379 (Clockwise)
Preceding gene: 170077424
Following gene: 170077427
Centisome position: 27.59
GC content: 54.69
Gene sequence:
>426_bases ATGACCTTTGAAAATTCCCCCCAGCGGTCTGGTTTTGAGCCGGAGTTGGGGGGCTTTTTAAGAAATGACACGGAACGGTC TGGGTTTGAACCGGAACTAGGTGGCCTGCTGCGCCAAAAAGGGGTGTATGTGGATGAAACCACCTGCATCGGCTGCAAAC ATTGCGCCCACACGGCCCCCAACACCTTTTATATCGAAGAAGAACATGGTCGGGCCCGGGCCTATCGCCAGGATGGAGAT GCTGAGGAAATTGTCCAAGAGGCGATTGATACCTGTCCGGTAGACTGCATCCATTGGCTAGATTACACGGAACTAAAGGC CAAAGAAGCAGCCAGGAAAAACCAGGTGATTCGGCCCCTCGGTTTTCCCCAGGATGGGGCGGGTCAGGCGATCGCCCGCA AACCTAAACCCTCCCGGAAACCCTAA
Upstream 100 bases:
>100_bases CATCCTAAATGAAACCAACAAACAAGGCTTCCAAGTCAGTGAACAGCAGAAAAACGAAGATGGCTCGATTCGCCTCGTCG TCCAACGCTGGAGCTAATGT
Downstream 100 bases:
>100_bases GCATTTAAAATTTTGCTTGGCTTATGGGTCTTCTGTAGCGGTGACAGCTTGATATTTGGCTTGGCAATAATCATTAAGGG CTTGGCCGATGGTTTGTTCT
Product: ferrodoxin I
Products: NA
Alternate protein names: 3Fe-4S Ferredoxin; Ferredoxin-Like Protein; Ferredoxin 4Fe-4S Type; Ferrodoxin I
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTFENSPQRSGFEPELGGFLRNDTERSGFEPELGGLLRQKGVYVDETTCIGCKHCAHTAPNTFYIEEEHGRARAYRQDGD AEEIVQEAIDTCPVDCIHWLDYTELKAKEAARKNQVIRPLGFPQDGAGQAIARKPKPSRKP
Sequences:
>Translated_141_residues MTFENSPQRSGFEPELGGFLRNDTERSGFEPELGGLLRQKGVYVDETTCIGCKHCAHTAPNTFYIEEEHGRARAYRQDGD AEEIVQEAIDTCPVDCIHWLDYTELKAKEAARKNQVIRPLGFPQDGAGQAIARKPKPSRKP >Mature_140_residues TFENSPQRSGFEPELGGFLRNDTERSGFEPELGGLLRQKGVYVDETTCIGCKHCAHTAPNTFYIEEEHGRARAYRQDGDA EEIVQEAIDTCPVDCIHWLDYTELKAKEAARKNQVIRPLGFPQDGAGQAIARKPKPSRKP
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15806; Mature: 15675
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFENSPQRSGFEPELGGFLRNDTERSGFEPELGGLLRQKGVYVDETTCIGCKHCAHTAP CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCC NTFYIEEEHGRARAYRQDGDAEEIVQEAIDTCPVDCIHWLDYTELKAKEAARKNQVIRPL CEEEEECCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCC GFPQDGAGQAIARKPKPSRKP CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFENSPQRSGFEPELGGFLRNDTERSGFEPELGGLLRQKGVYVDETTCIGCKHCAHTAP CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCC NTFYIEEEHGRARAYRQDGDAEEIVQEAIDTCPVDCIHWLDYTELKAKEAARKNQVIRPL CEEEEECCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCC GFPQDGAGQAIARKPKPSRKP CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA