Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is ubiE [H]

Identifier: 170077427

GI number: 170077427

Start: 830992

End: 831660

Strand: Direct

Name: ubiE [H]

Synonym: SYNPCC7002_A0805

Alternate gene names: 170077427

Gene position: 830992-831660 (Clockwise)

Preceding gene: 170077425

Following gene: 170077428

Centisome position: 27.63

GC content: 50.67

Gene sequence:

>669_bases
ATGGCGTTAACAAGAATTTTAGAACCGGAAGTGATGGACGATCCCGCCGAGGCGATCGCCTACGATGCGATGGACTTTCG
GGCGGTGAATCAAGATTTTGCGGATCTCGTGGTTACGACTTACTCCCAAGAAACCGCTTTCGTTTTAGATTTGGGCACAG
GGACAGCACAAATTCCGATTTTGTTAGGGCAACAGCGCCCCCAATGGCAGATTAAAGGCACCGATTTAGCGCAGTCGATG
CTCGCCCTAGGACAAAAAAACGTTGTGGCCGCAGGTTTAACAGCACAAATCGAGTTGGTTTATGCCGATGCGAAAAATTT
GCCCTGGCCCGACCAAAGCTTTGATGTGATTATTTCCAATAGCCTGATTCACCATTTACCTGATCCGTTGCCCTGTTTTC
AGGAAATGCGCCGTCTCCTCAAACCCCAGGGAAACATTATCGTGCGGGATTTATTTCGTCCCGATAGCACCGCCGCCATT
GACCAGATCGTTGCTGCTGCCGAGGGGCCAGGTTTTGATGCGCGTCAACGTCAATTATTCTGGGATTCGCTCCATGCGGC
GTTTACGGTGCCTGAAATTGAGGCGATCGCCACCGAAGCGGGCTTAACCAAGGCCCAAGTTTATCAATCTTCAGAACGCC
ATTGGACGCTGATTTTTCCCCAGCCTTAA

Upstream 100 bases:

>100_bases
ACATTACAGACGAACACTCAACATCGGCAGTGTAGCGAATTTTTTAGAACATTAGACAATCAGATCAATCCGGAGATATT
TTTTCAGGAATAAACGAAAG

Downstream 100 bases:

>100_bases
CGCCATGCAACAAAGAATAAATTTTTTAGCCTCAGTTCTGAAGTCATGCGTATTCGAGAGAAAAACTGTGATTATTGCCA
AACTATTGCGGCAGTTCGTT

Product: SAM dependent methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MALTRILEPEVMDDPAEAIAYDAMDFRAVNQDFADLVVTTYSQETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSM
LALGQKNVVAAGLTAQIELVYADAKNLPWPDQSFDVIISNSLIHHLPDPLPCFQEMRRLLKPQGNIIVRDLFRPDSTAAI
DQIVAAAEGPGFDARQRQLFWDSLHAAFTVPEIEAIATEAGLTKAQVYQSSERHWTLIFPQP

Sequences:

>Translated_222_residues
MALTRILEPEVMDDPAEAIAYDAMDFRAVNQDFADLVVTTYSQETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSM
LALGQKNVVAAGLTAQIELVYADAKNLPWPDQSFDVIISNSLIHHLPDPLPCFQEMRRLLKPQGNIIVRDLFRPDSTAAI
DQIVAAAEGPGFDARQRQLFWDSLHAAFTVPEIEAIATEAGLTKAQVYQSSERHWTLIFPQP
>Mature_221_residues
ALTRILEPEVMDDPAEAIAYDAMDFRAVNQDFADLVVTTYSQETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSML
ALGQKNVVAAGLTAQIELVYADAKNLPWPDQSFDVIISNSLIHHLPDPLPCFQEMRRLLKPQGNIIVRDLFRPDSTAAID
QIVAAAEGPGFDARQRQLFWDSLHAAFTVPEIEAIATEAGLTKAQVYQSSERHWTLIFPQP

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014122
- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 24597; Mature: 24466

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTRILEPEVMDDPAEAIAYDAMDFRAVNQDFADLVVTTYSQETAFVLDLGTGTAQIPI
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCEEEEEEECCCCEEEEE
LLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYADAKNLPWPDQSFDVIISN
EECCCCCCEEECCHHHHHHHHHCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCEEEEEC
SLIHHLPDPLPCFQEMRRLLKPQGNIIVRDLFRPDSTAAIDQIVAAAEGPGFDARQRQLF
CHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHH
WDSLHAAFTVPEIEAIATEAGLTKAQVYQSSERHWTLIFPQP
HHHHHHEECCCHHHHHHHHCCCHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
ALTRILEPEVMDDPAEAIAYDAMDFRAVNQDFADLVVTTYSQETAFVLDLGTGTAQIPI
CCCHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCEEEEEEECCCCEEEEE
LLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYADAKNLPWPDQSFDVIISN
EECCCCCCEEECCHHHHHHHHHCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCEEEEEC
SLIHHLPDPLPCFQEMRRLLKPQGNIIVRDLFRPDSTAAIDQIVAAAEGPGFDARQRQLF
CHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHH
WDSLHAAFTVPEIEAIATEAGLTKAQVYQSSERHWTLIFPQP
HHHHHHEECCCHHHHHHHHCCCHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA