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The map label for this gene is atpC

Identifier: 170077373

GI number: 170077373

Start: 779853

End: 780257

Strand: Direct

Name: atpC

Synonym: SYNPCC7002_A0750

Alternate gene names: 170077373

Gene position: 779853-780257 (Clockwise)

Preceding gene: 170077372

Following gene: 170077375

Centisome position: 25.93

GC content: 54.07

Gene sequence:

>405_bases
ATGGCTTTAAAAGTACGAGTGATCACCCCAGACCGGACGGTACTGGATGACAGTGTCGAAGAAGTCATCCTCCCCAGTAG
TTCTGGTCAAATCGGTATTTTGTCGGGCCACGCGCCCCTCCTCACAGCCCTCGAATCCGGCGTCATTCGCGTCCGGACCA
GTGGTTGGGAGAACATCGCAATTACCGATGGCTTTGCTGAGGTAGAAGCCAATGAAGTAAAGGTGCTGGTTAACACTGCA
GCCAAGGGTCAAGACATCGATCTTGAGGAAGCCCGCAAGGCCTTTGAAAGTGCAAAGGCACAACTTGATCAAGTCAATGC
GGCAGATCGTAAAGCAATCCTTGATGCCCGCAAAGAACTCAAGCGGACCCGGGCCCGCTACATGGCGGCTGGTGGCATGG
CATAG

Upstream 100 bases:

>100_bases
ACCCTGCTTCGCCTAAGACATCAGGTCAGTGCTACCGTTCTGCGGGGTGCTGACCTTGAACGTCAGAATTTTCCTTATTT
TTTGAATTAGATTTAAGCAA

Downstream 100 bases:

>100_bases
GCAATGTGTCGCCCCAGGGCCAAAAAATTTTGCAATAAAAAGGCAGCCCTAGAGCTGCCCATTTTTTTATAGAAATTAAT
TACAAAATAACAATCGTAAA

Product: ATP synthase F1, epsilon subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MALKVRVITPDRTVLDDSVEEVILPSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIAITDGFAEVEANEVKVLVNTA
AKGQDIDLEEARKAFESAKAQLDQVNAADRKAILDARKELKRTRARYMAAGGMA

Sequences:

>Translated_134_residues
MALKVRVITPDRTVLDDSVEEVILPSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIAITDGFAEVEANEVKVLVNTA
AKGQDIDLEEARKAFESAKAQLDQVNAADRKAILDARKELKRTRARYMAAGGMA
>Mature_133_residues
ALKVRVITPDRTVLDDSVEEVILPSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIAITDGFAEVEANEVKVLVNTAA
KGQDIDLEEARKAFESAKAQLDQVNAADRKAILDARKELKRTRARYMAAGGMA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=120, Percent_Identity=36.6666666666667, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SYNP2 (B1XI04)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734011.1
- GeneID:   6056583
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0750
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14402; Mature: 14270

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKVRVITPDRTVLDDSVEEVILPSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIA
CEEEEEEECCCCCHHHCCHHHEECCCCCCCEEEEECCCHHHHHHHCCEEEEEECCCCEEE
ITDGFAEVEANEVKVLVNTAAKGQDIDLEEARKAFESAKAQLDQVNAADRKAILDARKEL
EECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRTRARYMAAGGMA
HHHHHHHHHCCCCC
>Mature Secondary Structure 
ALKVRVITPDRTVLDDSVEEVILPSSSGQIGILSGHAPLLTALESGVIRVRTSGWENIA
EEEEEEECCCCCHHHCCHHHEECCCCCCCEEEEECCCHHHHHHHCCEEEEEECCCCEEE
ITDGFAEVEANEVKVLVNTAAKGQDIDLEEARKAFESAKAQLDQVNAADRKAILDARKEL
EECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRTRARYMAAGGMA
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA