| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077269
Identifier: 170077269
GI number: 170077269
Start: 676480
End: 677151
Strand: Direct
Name: 170077269
Synonym: SYNPCC7002_A0646
Alternate gene names: NA
Gene position: 676480-677151 (Clockwise)
Preceding gene: 170077266
Following gene: 170077270
Centisome position: 22.49
GC content: 56.4
Gene sequence:
>672_bases GTGGGTCATTTTATGCCACGGGCCGAGCCAAAACCGCCATTATTTTTACGGTTATGGGCGACAAATTCTGCTGGAATCGC CAAGCCGACCCTCAACGAAACCATTGCTGAATTATCGGCTGAAGACCGGGCCGCCATCGAACAAGAAATTGCGGGCATTC AGGCCCAACTAGATGTCCTCGAAGCGCGCACCCAACAACTAGAGGCAGAACTCGATCTGGGTCAACAACAGGCGGATCTC GGCGATCGCCTCACCAATTTGACCACACTCCTCGCTGCTGATCCCAGCACCTTTGACCCCCAGGCGACCCCCGCAACGAC TTCGCAAACTCCGGAACCGTTAAAAATCACCCTGCCCAGCAATGCCCTATTTAGTGCCGATGGGCAACTCGCCGCCGATG CCGCCGAAATTCTAGGGGCGATCGCCATCGATCTCCAGCAACAGGAGCGGCAAACGATCACCATTCGCAATTATCAAGTT GGGGAGGATGCCACCAAAGCAACAAGCCTCGCCCAACAGCAGGCCCAGGCCGTCCAAACTTACCTGGCCGAGGCTCTCCC CGGTGATTATCGTTGGCTCGTGGTGGGCTATGGTGAACAAGCCGCCGCTGATCCCCCAGAAGACACAACGGAAACCAGCA GCCAAGCCCGTCTTGAAATTAGTACCCAGTAG
Upstream 100 bases:
>100_bases GAAATCCCGCTTTTCTGTAACAAAATGGATCATCGCAACCTTGGGCCGCACAGCACTTTTGCTGGGTTCTGGTTTCGGGG CGATCGCCTTGGGGATCCTG
Downstream 100 bases:
>100_bases TTACCGGTTTTGCCGATGGATCTCCTCGATATCTTGCGCCAGGATTACCAAAAATTCCCCCAGAATCAAACCTTTGCCAT TTACAGTGACGATGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGHFMPRAEPKPPLFLRLWATNSAGIAKPTLNETIAELSAEDRAAIEQEIAGIQAQLDVLEARTQQLEAELDLGQQQADL GDRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPSNALFSADGQLAADAAEILGAIAIDLQQQERQTITIRNYQV GEDATKATSLAQQQAQAVQTYLAEALPGDYRWLVVGYGEQAAADPPEDTTETSSQARLEISTQ
Sequences:
>Translated_223_residues MGHFMPRAEPKPPLFLRLWATNSAGIAKPTLNETIAELSAEDRAAIEQEIAGIQAQLDVLEARTQQLEAELDLGQQQADL GDRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPSNALFSADGQLAADAAEILGAIAIDLQQQERQTITIRNYQV GEDATKATSLAQQQAQAVQTYLAEALPGDYRWLVVGYGEQAAADPPEDTTETSSQARLEISTQ >Mature_222_residues GHFMPRAEPKPPLFLRLWATNSAGIAKPTLNETIAELSAEDRAAIEQEIAGIQAQLDVLEARTQQLEAELDLGQQQADLG DRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPSNALFSADGQLAADAAEILGAIAIDLQQQERQTITIRNYQVG EDATKATSLAQQQAQAVQTYLAEALPGDYRWLVVGYGEQAAADPPEDTTETSSQARLEISTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23968; Mature: 23837
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHFMPRAEPKPPLFLRLWATNSAGIAKPTLNETIAELSAEDRAAIEQEIAGIQAQLDVL CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EARTQQLEAELDLGQQQADLGDRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECC NALFSADGQLAADAAEILGAIAIDLQQQERQTITIRNYQVGEDATKATSLAQQQAQAVQT CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH YLAEALPGDYRWLVVGYGEQAAADPPEDTTETSSQARLEISTQ HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure GHFMPRAEPKPPLFLRLWATNSAGIAKPTLNETIAELSAEDRAAIEQEIAGIQAQLDVL CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EARTQQLEAELDLGQQQADLGDRLTNLTTLLAADPSTFDPQATPATTSQTPEPLKITLPS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECC NALFSADGQLAADAAEILGAIAIDLQQQERQTITIRNYQVGEDATKATSLAQQQAQAVQT CCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH YLAEALPGDYRWLVVGYGEQAAADPPEDTTETSSQARLEISTQ HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA