Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077270

Identifier: 170077270

GI number: 170077270

Start: 677167

End: 677550

Strand: Direct

Name: 170077270

Synonym: SYNPCC7002_A0647

Alternate gene names: NA

Gene position: 677167-677550 (Clockwise)

Preceding gene: 170077269

Following gene: 170077278

Centisome position: 22.51

GC content: 47.14

Gene sequence:

>384_bases
ATGGATCTCCTCGATATCTTGCGCCAGGATTACCAAAAATTCCCCCAGAATCAAACCTTTGCCATTTACAGTGACGATGT
TTTTTTCCAAGACCCCCTCAATCAGTTCCGGGGACGCGATCGCTATCAAAAAATGATTGGTTTTTTAGGGCGCTGGTTTC
GGGATATTCACTTGGAACTCCACGACCTCCAGCAAACTCAACAGACCATCCGCAGCGAGTGGACTTTATCCATGACCTGT
CCTCTGCCCTGGCAACCCCGATTACGCATTTCTGGCCATAGTCTTTTGGAAATCAACGCTGATAACTTGATCGTCTCCCA
CATTGATTACTGGCAAAAACCGCCCCTAAAGATTTTGCTGCAAGTTTTTCAACCGTCTCCCTAG

Upstream 100 bases:

>100_bases
CTATGGTGAACAAGCCGCCGCTGATCCCCCAGAAGACACAACGGAAACCAGCAGCCAAGCCCGTCTTGAAATTAGTACCC
AGTAGTTACCGGTTTTGCCG

Downstream 100 bases:

>100_bases
CTTATTTCTTTTACGCTCAGACAGATTTTGTTTGCCATTGCTGTAAAACTTCAACGAGAAATTCCGCCAACGTGACCCCA
TCAACCCCGGCAACAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDLLDILRQDYQKFPQNQTFAIYSDDVFFQDPLNQFRGRDRYQKMIGFLGRWFRDIHLELHDLQQTQQTIRSEWTLSMTC
PLPWQPRLRISGHSLLEINADNLIVSHIDYWQKPPLKILLQVFQPSP

Sequences:

>Translated_127_residues
MDLLDILRQDYQKFPQNQTFAIYSDDVFFQDPLNQFRGRDRYQKMIGFLGRWFRDIHLELHDLQQTQQTIRSEWTLSMTC
PLPWQPRLRISGHSLLEINADNLIVSHIDYWQKPPLKILLQVFQPSP
>Mature_127_residues
MDLLDILRQDYQKFPQNQTFAIYSDDVFFQDPLNQFRGRDRYQKMIGFLGRWFRDIHLELHDLQQTQQTIRSEWTLSMTC
PLPWQPRLRISGHSLLEINADNLIVSHIDYWQKPPLKILLQVFQPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15301; Mature: 15301

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLDILRQDYQKFPQNQTFAIYSDDVFFQDPLNQFRGRDRYQKMIGFLGRWFRDIHLEL
CCHHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
HDLQQTQQTIRSEWTLSMTCPLPWQPRLRISGHSLLEINADNLIVSHIDYWQKPPLKILL
HHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEEECCCCEEEECHHHCCCCHHHHHH
QVFQPSP
HHHCCCC
>Mature Secondary Structure
MDLLDILRQDYQKFPQNQTFAIYSDDVFFQDPLNQFRGRDRYQKMIGFLGRWFRDIHLEL
CCHHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
HDLQQTQQTIRSEWTLSMTCPLPWQPRLRISGHSLLEINADNLIVSHIDYWQKPPLKILL
HHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEEECCCCEEEECHHHCCCCHHHHHH
QVFQPSP
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA