BacMap

Definition	Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession	NC_010475
Length	3,008,047

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The map label for this gene is deaD [H]

Identifier: 170077242

GI number: 170077242

Start: 647534

End: 648997

Strand: Reverse

Name: deaD [H]

Synonym: SYNPCC7002_A0618

Alternate gene names: 170077242

Gene position: 648997-647534 (Counterclockwise)

Preceding gene: 170077243

Following gene: 170077232

Centisome position: 21.58

GC content: 54.03

Gene sequence:

>1464_bases
ATGACCACTTCTTTTCAAACCATCGGCTTATCCGACGCTCGCGTTGACCTGTTAGAAAATATCGGCTTCGAAAAGCCCAC
CGAGATTCAAAGTAAAGCGATCCCCGCAATCCTCGAAGGCCGGGACGTGGTGGGACTATCCCAAACAGGTACAGGTAAAA
CCGCCGCCTACTCCCTGCCTTTCCTTGAAAAAATTGACCTGGAACAAAAGACCGTCCAGGGTTTGATTCTGACCCCCACC
CGTGAACTGGCGGTGCAGGTGACCCAGTCCCTCAAGGAATTCGCCGTGGATCGTCGTCTCTGGGTGCTCACCGTCTGCGG
TGGTCAATCCATGGAACGGCAAATTCGCAGCCTGCAAAAGGGCGTCCACATTGTTGTGGGTACGCCGGGCCGGGTCATCG
ATCTCCTCGAACGGGGTAAGTTGTCCTTTGAAGAACTCCGTTGGGCAGTGCTTGACGAAGCCGATGAAATGCTCAGTATG
GGCTTCATTGATGATGTGAAAAAGATTTTGCGTCAGTCCCCCAAAACTCGCCAAACGGTTTGTTTCTCGGCGACCATGCC
CCCCGCAATCCGGGATCTGGTGGAAAATTTCCTCAATGACCCGATCAACATCACGATCAAACAGCCCCAGGTCACGCCTG
ACCGCATTGCCCAAGAAGTCTATATGATTCCGCGCGGTTGGTCAAAAACCAAAGCCCTCCTGCCCATCTTGGAAATGGCA
AACCCAGAGTCGGCGATTATCTTCGTGCGCACGAAACGTACAGCTTCGGAGTTGACCAATGAGTTGGTTGAAGCGGGCCA
AAGTGCCGATGAGTACCATGGCGACCTCAACCAAAACCAACGGGAAAAACTGGTACGTCGCTTTAAGGATGGCAAGATCA
AGATGATTGTCGCCACGGATATTGCGGCGCGGGGTCTGGACGTGGAAAACCTCAGCCACGTGATTAACTTTGATTTACCA
GATAATACGGAAAGTTACATTCACCGCATCGGTCGGACGGGTCGGGCTGGTAAAACGGGAACGGCGATCGCCCTCGTCGA
ACCCAGCGATCGCCGGTTGTTACGTCAAATTGAACGGCGCGTCAAACAGTCCCTCAAGGTTTCGACTATTCCGAGCCGCA
CTGAAGTAGAAGCCCAACGAGTGACCCGCCTGGAAACCCAAGTACGGGAAGCCTTGGCCGGGGAACGGATGGCCTCCTTC
TTGCCGATTGTGAAGCGTTTGGGTGATGAGTATGATCCCCAGGCGATCGCCGCGGCGGTATTGCAAATGATGTACGACAA
TAATTCCCCCGAATGGCTCAACGAAGATTGGGAAGTACCGGAAGTCAACACCAAGACAGGTCTCCCCAAGCCGACGAAAA
AAGGTGGCCGCAGCGGACGTCGTTCTAACTACAAAGGGAGTGGCGGTGGCTACAAAGGCGATCGCTCCCGGGGACGCCGT
TCCTACAGTTCCAACCATTCCTAA

Upstream 100 bases:

>100_bases
TTGGGAAAAGGGTTGGGGGAGGGATTGTACTCAAAAAAAGTCATTCCCAATTTTTGTCAAACCTTAGCAAAAACCCATCC
ATAAACCTTACAACTTTTTT

Downstream 100 bases:

>100_bases
AAATGTGATATCGCTGACTCCCCAGGTGAGCCAACTCACTAAATCTAGGGGAATGCGACAAGCATCATAGAAATACAAAA
AGAGCCTCCATTTCCGATGA

Product: ATP-dependent RNA helicase DeaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLPFLEKIDLEQKTVQGLILTPT
RELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQKGVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSM
GFIDDVKKILRQSPKTRQTVCFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
NPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATDIAARGLDVENLSHVINFDLP
DNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERRVKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASF
LPIVKRLGDEYDPQAIAAAVLQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRR
SYSSNHS

Sequences:

>Translated_487_residues
MTTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLPFLEKIDLEQKTVQGLILTPT
RELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQKGVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSM
GFIDDVKKILRQSPKTRQTVCFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
NPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATDIAARGLDVENLSHVINFDLP
DNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERRVKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASF
LPIVKRLGDEYDPQAIAAAVLQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRR
SYSSNHS
>Mature_486_residues
TTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLPFLEKIDLEQKTVQGLILTPTR
ELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQKGVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSMG
FIDDVKKILRQSPKTRQTVCFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMAN
PESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATDIAARGLDVENLSHVINFDLPD
NTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERRVKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASFL
PIVKRLGDEYDPQAIAAAVLQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRRS
YSSNHS

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=41.7127071823204, Blast_Score=286, Evalue=4e-77,
Organism=Homo sapiens, GI4758138, Length=344, Percent_Identity=41.2790697674419, Blast_Score=259, Evalue=5e-69,
Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=38.5245901639344, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=38.5245901639344, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=38.5245901639344, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=38.9502762430939, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=38.9502762430939, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=37.6657824933687, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=37.6657824933687, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI222352149, Length=366, Percent_Identity=39.6174863387978, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=38.0102040816327, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI20149629, Length=397, Percent_Identity=35.7682619647355, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=39.2045454545455, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=38.7362637362637, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=38.7640449438202, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=36.2397820163488, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=36.2397820163488, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI13129006, Length=390, Percent_Identity=35.3846153846154, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=35.2941176470588, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=36.1643835616438, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=36.1643835616438, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=36.1643835616438, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=36.1643835616438, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=33.5195530726257, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=36.4902506963788, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI55749865, Length=363, Percent_Identity=36.6391184573003, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI31542656, Length=392, Percent_Identity=35.2040816326531, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI50659095, Length=391, Percent_Identity=34.5268542199489, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI41327776, Length=393, Percent_Identity=33.0788804071247, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=34.5714285714286, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=34.5714285714286, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=34.3406593406593, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI164419732, Length=370, Percent_Identity=34.5945945945946, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI21040371, Length=361, Percent_Identity=31.3019390581717, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=30.5785123966942, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=30.5785123966942, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI6005743, Length=360, Percent_Identity=35.8333333333333, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI8922886, Length=360, Percent_Identity=35.5555555555556, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=36.734693877551, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=34.0599455040872, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=34.0599455040872, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI62241024, Length=321, Percent_Identity=36.7601246105919, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI256223453, Length=377, Percent_Identity=29.7082228116711, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=29.5399515738499, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=31.5642458100559, Blast_Score=175, Evalue=8e-44,
Organism=Homo sapiens, GI38327634, Length=402, Percent_Identity=28.8557213930348, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI9506931, Length=393, Percent_Identity=29.7709923664122, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=31.1953352769679, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=30.8080808080808, Blast_Score=140, Evalue=4e-33,
Organism=Homo sapiens, GI20336298, Length=246, Percent_Identity=33.739837398374, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI9966805, Length=361, Percent_Identity=29.6398891966759, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI154759257, Length=460, Percent_Identity=27.8260869565217, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI169218196, Length=352, Percent_Identity=25, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI110735439, Length=352, Percent_Identity=25, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4557365, Length=352, Percent_Identity=24.4318181818182, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI87082221, Length=427, Percent_Identity=43.559718969555, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=40.1069518716578, Blast_Score=291, Evalue=5e-80,
Organism=Escherichia coli, GI1787605, Length=382, Percent_Identity=39.7905759162304, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=38.6058981233244, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1790214, Length=373, Percent_Identity=36.9973190348526, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI48994977, Length=359, Percent_Identity=25.6267409470752, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71987143, Length=355, Percent_Identity=40, Blast_Score=283, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=41.2256267409471, Blast_Score=281, Evalue=4e-76,
Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=40.9470752089136, Blast_Score=281, Evalue=7e-76,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=35.8126721763085, Blast_Score=248, Evalue=4e-66,
Organism=Caenorhabditis elegans, GI115533224, Length=359, Percent_Identity=39.5543175487465, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=36.5671641791045, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=36.745406824147, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=36.745406824147, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=36.745406824147, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=38.7640449438202, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17552114, Length=359, Percent_Identity=34.8189415041783, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=35.1063829787234, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=33.6231884057971, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=33.6231884057971, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=425, Percent_Identity=33.1764705882353, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17537549, Length=388, Percent_Identity=34.5360824742268, Blast_Score=218, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=35.5882352941176, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=36.5168539325843, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI115532548, Length=396, Percent_Identity=32.0707070707071, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=32.8, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=394, Percent_Identity=33.756345177665, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17507881, Length=383, Percent_Identity=33.6814621409922, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=383, Percent_Identity=34.7258485639687, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17509811, Length=433, Percent_Identity=31.1778290993072, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=30.958904109589, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=32.7635327635328, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=407, Percent_Identity=32.1867321867322, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI193206561, Length=354, Percent_Identity=30.225988700565, Blast_Score=187, Evalue=9e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=392, Percent_Identity=30.6122448979592, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=31.0160427807487, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=29.7766749379653, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=364, Percent_Identity=32.6923076923077, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=31.0160427807487, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17507641, Length=403, Percent_Identity=30.0248138957816, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17556951, Length=400, Percent_Identity=28.75, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=26.6490765171504, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=25.7907542579075, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=395, Percent_Identity=30.126582278481, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI25148291, Length=366, Percent_Identity=28.1420765027322, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=33.8461538461538, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=360, Percent_Identity=25.2777777777778, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=25.8953168044077, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=86, Percent_Identity=51.1627906976744, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI25145561, Length=366, Percent_Identity=26.5027322404372, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32564293, Length=375, Percent_Identity=24.5333333333333, Blast_Score=77, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324217, Length=374, Percent_Identity=39.572192513369, Blast_Score=273, Evalue=3e-74,
Organism=Saccharomyces cerevisiae, GI6320224, Length=378, Percent_Identity=37.5661375661376, Blast_Score=272, Evalue=8e-74,
Organism=Saccharomyces cerevisiae, GI6321856, Length=364, Percent_Identity=39.8351648351648, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=39.344262295082, Blast_Score=257, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=37.5342465753425, Blast_Score=250, Evalue=4e-67,
Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=40.6432748538012, Blast_Score=246, Evalue=7e-66,
Organism=Saccharomyces cerevisiae, GI6320041, Length=351, Percent_Identity=35.6125356125356, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6322912, Length=351, Percent_Identity=37.6068376068376, Blast_Score=227, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6322323, Length=351, Percent_Identity=37.6068376068376, Blast_Score=227, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6323021, Length=378, Percent_Identity=35.4497354497354, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6320449, Length=376, Percent_Identity=35.3723404255319, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320173, Length=411, Percent_Identity=31.1435523114355, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6324620, Length=355, Percent_Identity=34.9295774647887, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6321963, Length=418, Percent_Identity=31.3397129186603, Blast_Score=199, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6319714, Length=375, Percent_Identity=32.8, Blast_Score=194, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=475, Percent_Identity=28.8421052631579, Blast_Score=189, Evalue=9e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=31.1111111111111, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=32.2274881516588, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=32.9577464788732, Blast_Score=172, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6322427, Length=372, Percent_Identity=29.5698924731183, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=29.4685990338164, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=365, Percent_Identity=31.5068493150685, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=31.7808219178082, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322876, Length=428, Percent_Identity=28.2710280373832, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=26.0115606936416, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6321374, Length=449, Percent_Identity=23.6080178173719, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24645031, Length=356, Percent_Identity=39.0449438202247, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=39.142091152815, Blast_Score=264, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24584399, Length=357, Percent_Identity=38.655462184874, Blast_Score=263, Evalue=1e-70,
Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=37.7952755905512, Blast_Score=256, Evalue=3e-68,
Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=37.1273712737127, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=38.9204545454545, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24582080, Length=349, Percent_Identity=39.2550143266476, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24582078, Length=349, Percent_Identity=39.2550143266476, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI17136248, Length=349, Percent_Identity=39.2550143266476, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24582075, Length=349, Percent_Identity=39.2550143266476, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=37.874659400545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=38.9204545454545, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24584994, Length=402, Percent_Identity=38.0597014925373, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=36.7231638418079, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24585582, Length=418, Percent_Identity=34.2105263157895, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=35.9673024523161, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI21356161, Length=402, Percent_Identity=35.8208955223881, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI28575014, Length=350, Percent_Identity=35.4285714285714, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24583279, Length=345, Percent_Identity=33.9130434782609, Blast_Score=226, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24583281, Length=345, Percent_Identity=33.9130434782609, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=37.6996805111821, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI17136814, Length=376, Percent_Identity=35.1063829787234, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24581954, Length=362, Percent_Identity=30.939226519337, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581952, Length=362, Percent_Identity=30.939226519337, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581956, Length=362, Percent_Identity=30.939226519337, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI28571808, Length=405, Percent_Identity=30.6172839506173, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI28571809, Length=405, Percent_Identity=30.6172839506173, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI21355559, Length=366, Percent_Identity=33.0601092896175, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24666101, Length=378, Percent_Identity=30.4232804232804, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI17647335, Length=377, Percent_Identity=28.1167108753316, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=28.0748663101604, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24643725, Length=399, Percent_Identity=26.5664160401003, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=29.2307692307692, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI20130173, Length=319, Percent_Identity=29.4670846394984, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI19920478, Length=371, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI28571338, Length=223, Percent_Identity=33.1838565022422, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859659, Length=223, Percent_Identity=33.1838565022422, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17136666, Length=447, Percent_Identity=26.3982102908277, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=26.2247838616715, Blast_Score=119, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 54493; Mature: 54362

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLP
CCCCCEECCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCEEEECCCCCCCCEEECCC
FLEKIDLEQKTVQGLILTPTRELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQK
CHHHHCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHC
GVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSMGFIDDVKKILRQSPKTRQTV
CCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
CFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
EEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC
NPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATD
CCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEC
IAARGLDVENLSHVINFDLPDNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERR
HHHCCCCHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
VKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASFLPIVKRLGDEYDPQAIAAAV
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCC
SYSSNHS
CCCCCCC
>Mature Secondary Structure 
TTSFQTIGLSDARVDLLENIGFEKPTEIQSKAIPAILEGRDVVGLSQTGTGKTAAYSLP
CCCCEECCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCCEEEECCCCCCCCEEECCC
FLEKIDLEQKTVQGLILTPTRELAVQVTQSLKEFAVDRRLWVLTVCGGQSMERQIRSLQK
CHHHHCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHC
GVHIVVGTPGRVIDLLERGKLSFEELRWAVLDEADEMLSMGFIDDVKKILRQSPKTRQTV
CCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE
CFSATMPPAIRDLVENFLNDPINITIKQPQVTPDRIAQEVYMIPRGWSKTKALLPILEMA
EEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC
NPESAIIFVRTKRTASELTNELVEAGQSADEYHGDLNQNQREKLVRRFKDGKIKMIVATD
CCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEC
IAARGLDVENLSHVINFDLPDNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERR
HHHCCCCHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
VKQSLKVSTIPSRTEVEAQRVTRLETQVREALAGERMASFLPIVKRLGDEYDPQAIAAAV
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQMMYDNNSPEWLNEDWEVPEVNTKTGLPKPTKKGGRSGRRSNYKGSGGGYKGDRSRGRR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCC
SYSSNHS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]