Click here to switch to the map view.

The map label for this gene is 170077239

Identifier: 170077239

GI number: 170077239

Start: 644774

End: 646444

Strand: Direct

Name: 170077239

Synonym: SYNPCC7002_A0615

Alternate gene names: NA

Gene position: 644774-646444 (Clockwise)

Preceding gene: 170077238

Following gene: 170077240

Centisome position: 21.43

GC content: 52.06

Gene sequence:

>1671_bases
GTGAAAAACATTCCTAAGCTTCCCATGAAACTGCTGTTGGTAGATGATGATCCCATTTTTCGTCTAGGCTTTTGTACCGC
TTTGGCCCAGGAAACGGATTGGGCGATCGCCGCAGAAAATTTCAGCACCATTTTGGCAGCATCCCCCCGCAAGGATTTGG
ATCTAATTCTCTGTGATCCCGCCTGGCAGGGGGATCGTCATTGGCGTCGATACCGCGAACTACAACGCCTTTACCCCACA
ACGCCCCTGGTTCTTTGCACGGCACAATTGGATTCAGAGCGGATTTTACAGGCAAAACGGGATGGACTGGCAGGTTATTT
CCCGAAAGGATTGGCGATCGCCGATCTCGTCCCGGAGCTGAGTACCATCGCCGCTGGTGGTAAAGTTTGGTCCCAACGTC
CCCAGGGCATTAACCAAAATTTGTTCGCTGGAATGCGTCGCCGGGGCCTTAACCAGATTTACACAGCCCTAGATCGCGTC
GAAACCTACCTCGCCCAAGAGAATCTCCCGCCCCTGTACCGTGCAGTTTTCGCTGGACAACAACGGGAACTCAAAACAGC
AGCCTGGCTCCTGCGCCATTGTCTGCCCCAAAGTGCCATTTTCCTCAATACAGTTCCTCCCGCCCAGCCCCAAACGCCTC
CCGCCGGGGCGATCGCCATTGCCTCACCCGTAGAGATCACGACGACCAATAGCCGCTGGCAAATTCTCCTCGAAAAGACC
TTTGTGAAGCTCAATGGCTCCCTGAAAAATGCCACTGGCAGTAGCCTAGAACTAGAGATTGTCACCCCAGAAAAACGACG
GGAACTGCTCTACATCATTCTGCAACAACTCAATTTTATTTTTAATGATCCCCAGTGGAAAAATTTAGATCCCGAAGCCT
TCCAAGCCCAACATCAACGCAGCATTCGCAACCTCTGGAAATTTAGTGCCCAGGAATTTATTGGCCGCTACCACCTCACC
GCTGACAATCAGGCCGAGGGCTTTTTGGAGTTGCTCAATCGGGTGGCGATCGCCAATGCCCCAGACCTAAACCAAAGACT
ACCCCAAAGCGACGACTTATTCGCCTATCTCCTGCAAGACCAGCCCCTCAAGATTGATAATGTCACCTATCGCCTTGAGG
CCAGGGAAGCCCTACGACGCAGCCAACTCATTTTAGAAAATTTGTTGATCACCGTCGGTAACGATATCCTGCAATTTATC
TTGAATACCTTACCGGAACCAGAATTACTCAAGGCAGAAATTTACCAGCCAAAACTGCGCTCTTCCCGAAACATTGCCCG
TTTTCGCAATGATCTATCGTGGGCCTATCGCCTGCGCAAATATTGGTTAGAACCGAAGGCCATTTTTGAAAGTCAACATC
AATTTTTGAGCGTTAGTCCAGTCGGCATCGTGCAAACGGCCGTTTACCAACCCCGATCCGCAGAACTCGCCAACCTTGAG
GGGATTCCCTGGCTGGTGACGATTCTCCTGGAACTGAGGGATGCCCTTGCCCCCCGGATTCGCGCCCTCGTGGCCTGGCT
CGGTGAAATTTTAGTTTATGTGCTGACCAATGTGATTGGCCGGGCCCTTGGGTTAATCGCTAGGGGCATCGTCGAAGGAG
CTGGCAGCAGTTGGCAACATCTCCGGGCGCGCCAAATTGAGCTAGCGAACATGGCCCGAAAAAATTCCTAA

Upstream 100 bases:

>100_bases
GGGGTTAACGGGTAGCCTTTAACCAGAAAATCCGCAAGAAGTTTGTGGGGAGCGATGTATTGCAGGCGTCAACCAGTACA
CTGGGATCGTTGGCAACTCA

Downstream 100 bases:

>100_bases
AAAGACAATAAGTCTGCAAACTGGCTTCAGAGAAACTGCTATGATCCTGGTTGCAATTGCCTTTCTCTGCCATGGCTTAC
CGTAATCCCGCTCCCACCGT

Product: two-component response regulator ycf55-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MKNIPKLPMKLLLVDDDPIFRLGFCTALAQETDWAIAAENFSTILAASPRKDLDLILCDPAWQGDRHWRRYRELQRLYPT
TPLVLCTAQLDSERILQAKRDGLAGYFPKGLAIADLVPELSTIAAGGKVWSQRPQGINQNLFAGMRRRGLNQIYTALDRV
ETYLAQENLPPLYRAVFAGQQRELKTAAWLLRHCLPQSAIFLNTVPPAQPQTPPAGAIAIASPVEITTTNSRWQILLEKT
FVKLNGSLKNATGSSLELEIVTPEKRRELLYIILQQLNFIFNDPQWKNLDPEAFQAQHQRSIRNLWKFSAQEFIGRYHLT
ADNQAEGFLELLNRVAIANAPDLNQRLPQSDDLFAYLLQDQPLKIDNVTYRLEAREALRRSQLILENLLITVGNDILQFI
LNTLPEPELLKAEIYQPKLRSSRNIARFRNDLSWAYRLRKYWLEPKAIFESQHQFLSVSPVGIVQTAVYQPRSAELANLE
GIPWLVTILLELRDALAPRIRALVAWLGEILVYVLTNVIGRALGLIARGIVEGAGSSWQHLRARQIELANMARKNS

Sequences:

>Translated_556_residues
MKNIPKLPMKLLLVDDDPIFRLGFCTALAQETDWAIAAENFSTILAASPRKDLDLILCDPAWQGDRHWRRYRELQRLYPT
TPLVLCTAQLDSERILQAKRDGLAGYFPKGLAIADLVPELSTIAAGGKVWSQRPQGINQNLFAGMRRRGLNQIYTALDRV
ETYLAQENLPPLYRAVFAGQQRELKTAAWLLRHCLPQSAIFLNTVPPAQPQTPPAGAIAIASPVEITTTNSRWQILLEKT
FVKLNGSLKNATGSSLELEIVTPEKRRELLYIILQQLNFIFNDPQWKNLDPEAFQAQHQRSIRNLWKFSAQEFIGRYHLT
ADNQAEGFLELLNRVAIANAPDLNQRLPQSDDLFAYLLQDQPLKIDNVTYRLEAREALRRSQLILENLLITVGNDILQFI
LNTLPEPELLKAEIYQPKLRSSRNIARFRNDLSWAYRLRKYWLEPKAIFESQHQFLSVSPVGIVQTAVYQPRSAELANLE
GIPWLVTILLELRDALAPRIRALVAWLGEILVYVLTNVIGRALGLIARGIVEGAGSSWQHLRARQIELANMARKNS
>Mature_556_residues
MKNIPKLPMKLLLVDDDPIFRLGFCTALAQETDWAIAAENFSTILAASPRKDLDLILCDPAWQGDRHWRRYRELQRLYPT
TPLVLCTAQLDSERILQAKRDGLAGYFPKGLAIADLVPELSTIAAGGKVWSQRPQGINQNLFAGMRRRGLNQIYTALDRV
ETYLAQENLPPLYRAVFAGQQRELKTAAWLLRHCLPQSAIFLNTVPPAQPQTPPAGAIAIASPVEITTTNSRWQILLEKT
FVKLNGSLKNATGSSLELEIVTPEKRRELLYIILQQLNFIFNDPQWKNLDPEAFQAQHQRSIRNLWKFSAQEFIGRYHLT
ADNQAEGFLELLNRVAIANAPDLNQRLPQSDDLFAYLLQDQPLKIDNVTYRLEAREALRRSQLILENLLITVGNDILQFI
LNTLPEPELLKAEIYQPKLRSSRNIARFRNDLSWAYRLRKYWLEPKAIFESQHQFLSVSPVGIVQTAVYQPRSAELANLE
GIPWLVTILLELRDALAPRIRALVAWLGEILVYVLTNVIGRALGLIARGIVEGAGSSWQHLRARQIELANMARKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR016837
- InterPro:   IPR022552 [H]

Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 63180; Mature: 63180

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIPKLPMKLLLVDDDPIFRLGFCTALAQETDWAIAAENFSTILAASPRKDLDLILCDP
CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCHHHEECCCCCCCEEEEECC
AWQGDRHWRRYRELQRLYPTTPLVLCTAQLDSERILQAKRDGLAGYFPKGLAIADLVPEL
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
STIAAGGKVWSQRPQGINQNLFAGMRRRGLNQIYTALDRVETYLAQENLPPLYRAVFAGQ
HHHHCCCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
QRELKTAAWLLRHCLPQSAIFLNTVPPAQPQTPPAGAIAIASPVEITTTNSRWQILLEKT
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCHHEEHEEHH
FVKLNGSLKNATGSSLELEIVTPEKRRELLYIILQQLNFIFNDPQWKNLDPEAFQAQHQR
HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SIRNLWKFSAQEFIGRYHLTADNQAEGFLELLNRVAIANAPDLNQRLPQSDDLFAYLLQD
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEECC
QPLKIDNVTYRLEAREALRRSQLILENLLITVGNDILQFILNTLPEPELLKAEIYQPKLR
CCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
SSRNIARFRNDLSWAYRLRKYWLEPKAIFESQHQFLSVSPVGIVQTAVYQPRSAELANLE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHEEECCCHHHHHHHHCCCCCCCCCCCC
GIPWLVTILLELRDALAPRIRALVAWLGEILVYVLTNVIGRALGLIARGIVEGAGSSWQH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRARQIELANMARKNS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNIPKLPMKLLLVDDDPIFRLGFCTALAQETDWAIAAENFSTILAASPRKDLDLILCDP
CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCHHHEECCCCCCCEEEEECC
AWQGDRHWRRYRELQRLYPTTPLVLCTAQLDSERILQAKRDGLAGYFPKGLAIADLVPEL
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
STIAAGGKVWSQRPQGINQNLFAGMRRRGLNQIYTALDRVETYLAQENLPPLYRAVFAGQ
HHHHCCCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
QRELKTAAWLLRHCLPQSAIFLNTVPPAQPQTPPAGAIAIASPVEITTTNSRWQILLEKT
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCHHEEHEEHH
FVKLNGSLKNATGSSLELEIVTPEKRRELLYIILQQLNFIFNDPQWKNLDPEAFQAQHQR
HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SIRNLWKFSAQEFIGRYHLTADNQAEGFLELLNRVAIANAPDLNQRLPQSDDLFAYLLQD
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEECC
QPLKIDNVTYRLEAREALRRSQLILENLLITVGNDILQFILNTLPEPELLKAEIYQPKLR
CCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
SSRNIARFRNDLSWAYRLRKYWLEPKAIFESQHQFLSVSPVGIVQTAVYQPRSAELANLE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHEEECCCHHHHHHHHCCCCCCCCCCCC
GIPWLVTILLELRDALAPRIRALVAWLGEILVYVLTNVIGRALGLIARGIVEGAGSSWQH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRARQIELANMARKNS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]