The gene/protein map for NC_004088 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077180

Identifier: 170077180

GI number: 170077180

Start: 582274

End: 582594

Strand: Direct

Name: 170077180

Synonym: SYNPCC7002_A0555

Alternate gene names: NA

Gene position: 582274-582594 (Clockwise)

Preceding gene: 170077176

Following gene: 170077185

Centisome position: 19.36

GC content: 47.66

Gene sequence:

>321_bases
ATGGATAACGAAATTAAAAAATACCGCATGGTTTGCACCCTAACCTTTGGCGATATCTATGGGCAAATTATTGTTTGGCT
GATTGTCATCTTTCTGAGTCTTGCGACCACCCTCGCCCTTTGGAGTGCAACCCGGCAAGTTTATGCCCTGGCCACCGTTG
CCCTTGTTGTTGTCTTATCTTTGCCCTTTCTCTTATTTGCCTTTGTGACAACGCTACTCAATCACATTGAATTCGTGCCC
ATGGGCGAATCCGAATCTTCTAAAACCTTCCCAAGCCGTCGTACGCCCCCTTCCTCTACTAATCCGGCAACGGCAAGCTA
G

Upstream 100 bases:

>100_bases
TTGACCATTCATTCTCATAAATCGTTTACAACCAGAACATGATGCTGACTACAATCAGTCATCTTTGGCTAAAAACAAAA
ATAAAAATCAATTATTGATA

Downstream 100 bases:

>100_bases
GGATGAATTACGGAAGTGATGGCCCAGCCAGAGATAACAGTTAAATAGCCCCATGAAACAGGGGCGTTAGTGGTTGCACT
AGAGAAATCTGGAAAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDNEIKKYRMVCTLTFGDIYGQIIVWLIVIFLSLATTLALWSATRQVYALATVALVVVLSLPFLLFAFVTTLLNHIEFVP
MGESESSKTFPSRRTPPSSTNPATAS

Sequences:

>Translated_106_residues
MDNEIKKYRMVCTLTFGDIYGQIIVWLIVIFLSLATTLALWSATRQVYALATVALVVVLSLPFLLFAFVTTLLNHIEFVP
MGESESSKTFPSRRTPPSSTNPATAS
>Mature_106_residues
MDNEIKKYRMVCTLTFGDIYGQIIVWLIVIFLSLATTLALWSATRQVYALATVALVVVLSLPFLLFAFVTTLLNHIEFVP
MGESESSKTFPSRRTPPSSTNPATAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11744; Mature: 11744

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEIKKYRMVCTLTFGDIYGQIIVWLIVIFLSLATTLALWSATRQVYALATVALVVVLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFLLFAFVTTLLNHIEFVPMGESESSKTFPSRRTPPSSTNPATAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNEIKKYRMVCTLTFGDIYGQIIVWLIVIFLSLATTLALWSATRQVYALATVALVVVLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFLLFAFVTTLLNHIEFVPMGESESSKTFPSRRTPPSSTNPATAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA