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The map label for this gene is ndhL

Identifier: 170077185

GI number: 170077185

Start: 588119

End: 588352

Strand: Direct

Name: ndhL

Synonym: SYNPCC7002_A0560

Alternate gene names: 170077185

Gene position: 588119-588352 (Clockwise)

Preceding gene: 170077180

Following gene: 170077186

Centisome position: 19.55

GC content: 49.15

Gene sequence:

>234_bases
ATGCCCTTTGATATTCCCGTTGAAACCCTCCTGATTGCCACCCTCTACCTCAGCCTCAGCGTGACCTATCTGCTCGTTTT
GCCTGCTGGTCTCTATTTTTATCTCAATAACCGTTGGTATGTCGCCAGTTCCATCGAGCGACTTGTGATGTATTTCTTCG
TTTTCTTTTTGTTCCCTGGGATGCTCCTCCTAAGCCCTTTCCTGAATTTCCGTCCCCGCCGTCGCGAAGTCTAA

Upstream 100 bases:

>100_bases
GCCATAGACAAAAATAATTTCTCAAATCACCACACCTTGCTTGACCCTTGGGGCACTAGGATAAAATAATCCCCAAGCAA
ATCATCACCACCACAAACCC

Downstream 100 bases:

>100_bases
GGCTTTGCCGAATGAATTTTCCCATCCTTGCCAACTTCTCCCCCTAAAACCATGCGACGCATTGATATCTTGGCCATCAG
TTTCGGTATTTTCATCGTGG

Product: NADH dehydrogenase subunit L (inorganic carbon tranpsort protein)

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit L; NDH-1 subunit L; NDH-L

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MPFDIPVETLLIATLYLSLSVTYLLVLPAGLYFYLNNRWYVASSIERLVMYFFVFFLFPGMLLLSPFLNFRPRRREV

Sequences:

>Translated_77_residues
MPFDIPVETLLIATLYLSLSVTYLLVLPAGLYFYLNNRWYVASSIERLVMYFFVFFLFPGMLLLSPFLNFRPRRREV
>Mature_76_residues
PFDIPVETLLIATLYLSLSVTYLLVLPAGLYFYLNNRWYVASSIERLVMYFFVFFLFPGMLLLSPFLNFRPRRREV

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhL subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHL_SYNP2 (Q8KX34)

Other databases:

- EMBL:   AF381042
- EMBL:   CP000951
- RefSeq:   YP_001733823.1
- GeneID:   6055755
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0560
- HOGENOM:   HBG711505
- OMA:   LLFYWMN
- ProtClustDB:   CLSK893123
- GO:   GO:0006810
- HAMAP:   MF_01355
- InterPro:   IPR019654

Pfam domain/function: PF10716 NdhL

EC number: 1.6.5.3

Molecular weight: Translated: 9176; Mature: 9045

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a54f1a0)-; HASH(0x1aaf34d0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDIPVETLLIATLYLSLSVTYLLVLPAGLYFYLNNRWYVASSIERLVMYFFVFFLFPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
MLLLSPFLNFRPRRREV
HHHHHHHHCCCCCCCCH
>Mature Secondary Structure 
PFDIPVETLLIATLYLSLSVTYLLVLPAGLYFYLNNRWYVASSIERLVMYFFVFFLFPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
MLLLSPFLNFRPRRREV
HHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA