| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077149
Identifier: 170077149
GI number: 170077149
Start: 553836
End: 554219
Strand: Direct
Name: 170077149
Synonym: SYNPCC7002_A0524
Alternate gene names: NA
Gene position: 553836-554219 (Clockwise)
Preceding gene: 170077148
Following gene: 170077152
Centisome position: 18.41
GC content: 38.28
Gene sequence:
>384_bases ATGATTTTTAGAGCCTTTTTAGTTGGGATTCTAATTGCTTTTGGAGAAATTATTAATGGCAACTTGCGCGTTAGGTATCT CCAGAAAAAGTTTGGCCGCCGCAAAGGAAAAAATATTAGCCTCTGCTCAGGAATCTTGCTTTTTACCTTGATTGCCTACT TTTGCTTGCCTTGGATCAAGCCTCAAAATCTGCTTGAGTGTGCTGGCATTGGCTTGATTTGGGTTATGGTGATGTTGTCT TTGGATTTGTACTTTGGCAGAGTTGTATTTCGATTACCATGGCAAAAAATTGTGGATGATTTCAACCCACTCAAAGGTAA TTTCTTAGGCATTGGTATGCTTGTTTTGTTGTTTTGCCCAAGCGTAATATTTTTACTCAAGTAA
Upstream 100 bases:
>100_bases ATATGAACAATACAAAGCTTATTACAGCTATGGAGTATATATTGCCAGAAAATTGAATTAAAAAATAGCTAAACTGTTTT TCACTTCAGGCCAATGACCT
Downstream 100 bases:
>100_bases TCTTTTTAAAAGCGGCGATCGCCTTTTTCTTTCACTAATGAGGCATTCCCCATTTAAAGATTGCCGATCCCCAAGAGAGA CCCGCCCCAAAGCCAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MIFRAFLVGILIAFGEIINGNLRVRYLQKKFGRRKGKNISLCSGILLFTLIAYFCLPWIKPQNLLECAGIGLIWVMVMLS LDLYFGRVVFRLPWQKIVDDFNPLKGNFLGIGMLVLLFCPSVIFLLK
Sequences:
>Translated_127_residues MIFRAFLVGILIAFGEIINGNLRVRYLQKKFGRRKGKNISLCSGILLFTLIAYFCLPWIKPQNLLECAGIGLIWVMVMLS LDLYFGRVVFRLPWQKIVDDFNPLKGNFLGIGMLVLLFCPSVIFLLK >Mature_127_residues MIFRAFLVGILIAFGEIINGNLRVRYLQKKFGRRKGKNISLCSGILLFTLIAYFCLPWIKPQNLLECAGIGLIWVMVMLS LDLYFGRVVFRLPWQKIVDDFNPLKGNFLGIGMLVLLFCPSVIFLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14544; Mature: 14544
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRAFLVGILIAFGEIINGNLRVRYLQKKFGRRKGKNISLCSGILLFTLIAYFCLPWIK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PQNLLECAGIGLIWVMVMLSLDLYFGRVVFRLPWQKIVDDFNPLKGNFLGIGMLVLLFCP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHH SVIFLLK HHHHHCC >Mature Secondary Structure MIFRAFLVGILIAFGEIINGNLRVRYLQKKFGRRKGKNISLCSGILLFTLIAYFCLPWIK CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PQNLLECAGIGLIWVMVMLSLDLYFGRVVFRLPWQKIVDDFNPLKGNFLGIGMLVLLFCP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHH SVIFLLK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA