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The map label for this gene is dacB [C]

Identifier: 170077152

GI number: 170077152

Start: 556538

End: 557848

Strand: Direct

Name: dacB [C]

Synonym: SYNPCC7002_A0527

Alternate gene names: 170077152

Gene position: 556538-557848 (Clockwise)

Preceding gene: 170077149

Following gene: 170077153

Centisome position: 18.5

GC content: 52.94

Gene sequence:

>1311_bases
ATGGGGGTTTACGGTATGTTAGATGGGTTAACTTTGGGAGTTTTAGGTTTTTTGGGCTTTTTTCAGCAAGGGGATGGCAC
GGATTTGGCGATCGCCTCCTACGCAAGCTTGCAATGGCAAGAAGCGGGCCTCTTCGAGATTCGCTACCAACAGGACACCA
ATACCCAAACCATTGTGGATCGATACTTAGCGCAATTAGATTCTGGCGGCAAAGATCCGGCGTTACAGGGCATTTGGCTA
GAATCAGCCTGGTCAACCCTGGGGAGCCACCAGGGAAATCAACCGTTGTCGGCGGCCTCGCTAACGAAAATTGCGACCAC
CCTAGCGGCCTTGGAGCAGTGGCCGTTGACCCATCGCTTTACCACCCGTGTTTACACAACGGGGACGGTGGCTAATGGCC
TAGTTCAGGGAGATTTGGTTATTGAGGCAGGGGGCGATCCTTTATTTGTTTGGGAAGAGGCGATCGCCTTGGGAAATGCC
CTGAATCAAGCGGAAATTCGTCAAATTGAAGGAGATTTAATTATTGTCGGTGACTTCATGATGAATTATGTCGCCGAGCC
TGCCACCTCTGGGGACAGTCTGCGCCTCGCCCTTGATCAACGCGCCTGGAACGACGCCATCGAAACCCAATATCAACAGA
TGTCGCCGCGTCCGTCTCGTCCTCAGGTGGCGATCGCCGGAAAAATCCTTACTCGCCAAGCCCTACCCGATGGTGCAGCC
CTCGTCCTTAGCCATCAATCCTTAACCTTGGCCGACATCCTCAAACAAATGAATCTCTACAGCAACAATGCCGTAGCCGA
GGCGATCGCCCAAAACCTTGGTGGTGGCCCAGCCATGGGAACAGACATTGCCCAAAGCCTAAATATACCAACTTCAGAAA
TCCAGCTCATTAACGGATCTGGCCTCGGCGTCGAAAACAAAATCTCCCCCCGGGCTGCCGTAGCAATGCTCCAAGCCATC
GACAGCAAACTCCAAGGACAACCCTTCACCGTATTCGATCTCCTACCTATTGCGGGCCAAGATCGCGGCGGCACCGTCAA
TAACCGCACCATTCCCCCAGGCATCGCCTTTAAAACGGGCACCCTCAACCAAGTCAGTGCCCTCGCTGGGGTTATGCCAA
CCCAAACCCAAGGCAATGTCTGGTTTGCCATTATCAATAACGGCACCTGGGACGTTAGCGGCTATCGACAACAACAGGAT
CAACTCCTACAAACCCTAAGTGAGCAGTGGCCGGTGATTCCCCCCGTTGACTCAACTCAAAAATCTCCCCCAGACTATTT
CGGCAATCTCGAACGCATTCAAGCCAATTAA

Upstream 100 bases:

>100_bases
ACCAGAAGCCTGTTGGGTCACTGAAGTCACGGCTGAGAAGATTTTGATGTTGATATCATTGACCCAAATTTCGATTGTGA
TTTTGCATTGACGGGGATCA

Downstream 100 bases:

>100_bases
AAACCAAAGACCCAATCATTACTTCCAGAATTCCAAGCCGAGATAAAAAACTGTCCGAACAATGCTGAAACACTTACCTA
TCAAGATATTTAGGCGCCTT

Product: D-alanyl-D-alanine carboxypeptidase

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; D-Ala-D-Ala Carboxypeptidase 3 Family; D-Ala-D-Ala Carboxypeptidase; Carboxypeptidase; Serine-Type D-Ala-D-Ala Carboxypeptidase

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MGVYGMLDGLTLGVLGFLGFFQQGDGTDLAIASYASLQWQEAGLFEIRYQQDTNTQTIVDRYLAQLDSGGKDPALQGIWL
ESAWSTLGSHQGNQPLSAASLTKIATTLAALEQWPLTHRFTTRVYTTGTVANGLVQGDLVIEAGGDPLFVWEEAIALGNA
LNQAEIRQIEGDLIIVGDFMMNYVAEPATSGDSLRLALDQRAWNDAIETQYQQMSPRPSRPQVAIAGKILTRQALPDGAA
LVLSHQSLTLADILKQMNLYSNNAVAEAIAQNLGGGPAMGTDIAQSLNIPTSEIQLINGSGLGVENKISPRAAVAMLQAI
DSKLQGQPFTVFDLLPIAGQDRGGTVNNRTIPPGIAFKTGTLNQVSALAGVMPTQTQGNVWFAIINNGTWDVSGYRQQQD
QLLQTLSEQWPVIPPVDSTQKSPPDYFGNLERIQAN

Sequences:

>Translated_436_residues
MGVYGMLDGLTLGVLGFLGFFQQGDGTDLAIASYASLQWQEAGLFEIRYQQDTNTQTIVDRYLAQLDSGGKDPALQGIWL
ESAWSTLGSHQGNQPLSAASLTKIATTLAALEQWPLTHRFTTRVYTTGTVANGLVQGDLVIEAGGDPLFVWEEAIALGNA
LNQAEIRQIEGDLIIVGDFMMNYVAEPATSGDSLRLALDQRAWNDAIETQYQQMSPRPSRPQVAIAGKILTRQALPDGAA
LVLSHQSLTLADILKQMNLYSNNAVAEAIAQNLGGGPAMGTDIAQSLNIPTSEIQLINGSGLGVENKISPRAAVAMLQAI
DSKLQGQPFTVFDLLPIAGQDRGGTVNNRTIPPGIAFKTGTLNQVSALAGVMPTQTQGNVWFAIINNGTWDVSGYRQQQD
QLLQTLSEQWPVIPPVDSTQKSPPDYFGNLERIQAN
>Mature_435_residues
GVYGMLDGLTLGVLGFLGFFQQGDGTDLAIASYASLQWQEAGLFEIRYQQDTNTQTIVDRYLAQLDSGGKDPALQGIWLE
SAWSTLGSHQGNQPLSAASLTKIATTLAALEQWPLTHRFTTRVYTTGTVANGLVQGDLVIEAGGDPLFVWEEAIALGNAL
NQAEIRQIEGDLIIVGDFMMNYVAEPATSGDSLRLALDQRAWNDAIETQYQQMSPRPSRPQVAIAGKILTRQALPDGAAL
VLSHQSLTLADILKQMNLYSNNAVAEAIAQNLGGGPAMGTDIAQSLNIPTSEIQLINGSGLGVENKISPRAAVAMLQAID
SKLQGQPFTVFDLLPIAGQDRGGTVNNRTIPPGIAFKTGTLNQVSALAGVMPTQTQGNVWFAIINNGTWDVSGYRQQQDQ
LLQTLSEQWPVIPPVDSTQKSPPDYFGNLERIQAN

Specific function: Not Involved In Transpeptidation But Exclusively Catalyzes A Dd-Carboxypeptidase And Dd-Endopeptidase Reaction. [C]

COG id: COG2027

COG function: function code M; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.16.4; 3.4.99.- [C]

Molecular weight: Translated: 46850; Mature: 46719

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVYGMLDGLTLGVLGFLGFFQQGDGTDLAIASYASLQWQEAGLFEIRYQQDTNTQTIVD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCEECCCCEEEEEEECCCCHHHHHH
RYLAQLDSGGKDPALQGIWLESAWSTLGSHQGNQPLSAASLTKIATTLAALEQWPLTHRF
HHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
TTRVYTTGTVANGLVQGDLVIEAGGDPLFVWEEAIALGNALNQAEIRQIEGDLIIVGDFM
EEEEEECCHHHCCEEECCEEEECCCCEEEEHHHHHHHHCCCCHHHHHHHCCCEEEECHHH
MNYVAEPATSGDSLRLALDQRAWNDAIETQYQQMSPRPSRPQVAIAGKILTRQALPDGAA
HHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCE
LVLSHQSLTLADILKQMNLYSNNAVAEAIAQNLGGGPAMGTDIAQSLNIPTSEIQLINGS
EEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCC
GLGVENKISPRAAVAMLQAIDSKLQGQPFTVFDLLPIAGQDRGGTVNNRTIPPGIAFKTG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECC
TLNQVSALAGVMPTQTQGNVWFAIINNGTWDVSGYRQQQDQLLQTLSEQWPVIPPVDSTQ
CCHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
KSPPDYFGNLERIQAN
CCCCHHHCCCEEEECC
>Mature Secondary Structure 
GVYGMLDGLTLGVLGFLGFFQQGDGTDLAIASYASLQWQEAGLFEIRYQQDTNTQTIVD
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCEECCCCEEEEEEECCCCHHHHHH
RYLAQLDSGGKDPALQGIWLESAWSTLGSHQGNQPLSAASLTKIATTLAALEQWPLTHRF
HHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
TTRVYTTGTVANGLVQGDLVIEAGGDPLFVWEEAIALGNALNQAEIRQIEGDLIIVGDFM
EEEEEECCHHHCCEEECCEEEECCCCEEEEHHHHHHHHCCCCHHHHHHHCCCEEEECHHH
MNYVAEPATSGDSLRLALDQRAWNDAIETQYQQMSPRPSRPQVAIAGKILTRQALPDGAA
HHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCE
LVLSHQSLTLADILKQMNLYSNNAVAEAIAQNLGGGPAMGTDIAQSLNIPTSEIQLINGS
EEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCC
GLGVENKISPRAAVAMLQAIDSKLQGQPFTVFDLLPIAGQDRGGTVNNRTIPPGIAFKTG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECC
TLNQVSALAGVMPTQTQGNVWFAIINNGTWDVSGYRQQQDQLLQTLSEQWPVIPPVDSTQ
CCHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
KSPPDYFGNLERIQAN
CCCCHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Preferential cleavage is (Ac)2-L-Lys-D-Ala D-Ala and Also transpeptidation of peptidyl-alanyl moieties that are N-acyl substituents of D-alanine [C]

General reaction: Hydrolase; Acting on peptide bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA