| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077090
Identifier: 170077090
GI number: 170077090
Start: 494566
End: 495348
Strand: Direct
Name: 170077090
Synonym: SYNPCC7002_A0464
Alternate gene names: NA
Gene position: 494566-495348 (Clockwise)
Preceding gene: 170077088
Following gene: 170077097
Centisome position: 16.44
GC content: 49.3
Gene sequence:
>783_bases TTGACATATTGTTTAGGAATCTTAGTTCGCCAGGGTTTTATCCTCGCCGCCGATTCACGCACCAATGCGGGGGTTGATTA CGTTTCATCCTATCAAAAGTTATTTGATTTTTCCTGTCCAGGGGAACGGGTGCTTATTCTCTGCACTTCGGGGAATTTAT CCATTACCCAAGCCATCACCTATCAACTAGAACAAGAGATTCGCAGTGGTACGCCCCACAATCTCCATACAATCCCTAGT CTTTATGATGCTGCCCGCTACATTGGCCAAAAAACGCGCCAACTGCAACAGGAAGATCGGCCGTGGCTCGAGAAGGATCA TATTGATTTTCAGTGTAATTTTCTCCTCGCCGGACAAATTGCCGGGGCACCGCCGGAGCTTTTTCTTATTTACAGCCAGG GGAATTGCATTCGTGCGACCCCAGAGACGCCTTATCTACAGATTGGCGAAACGAAGTATGGCAAACCGATTTTGGATCGC ACCCTCTCCTATGAGTCTTCTTTAGATGCGATCGCCAAATCAGCCCTCCTCTCCATCGACTCCACAATGCGTTCTAACCT GTCTGTGGGGCCTCCCATCGATATGATTTCCTATGCGGTCAATAGCCTCAAAATCCAGCACCGTTTGCGGTTAGAAGCCC GCGACCCCTACTTACTCAAAATTCGTCGCTATTGGGAAAACGCCCTCAAACAAGCCTCCGAAGCAATGCCAGGGGTGGAA TGGAACCGGGACTTAGGGCAGCAGGATCAAGATCCCGCAAGCAATGGCACAGATTTTCTTTAG
Upstream 100 bases:
>100_bases ACAGCAACTGGCTTTTACTGTCTATGTTTTGACAGATTATGATCGGCCAACCCAAAAATTTTTTCTGTGAATCCCATCAG GTCAAACGAGGTCATCAAGA
Downstream 100 bases:
>100_bases TCTCACAATCACGATACAGACGCTAATTCTTTCGTCTGGTCATGCAGACTAGAGACACGTTCAAGATTGCCTTCGATCAC GTCACAAAGATCGTCTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAITYQLEQEIRSGTPHNLHTIPS LYDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQIAGAPPELFLIYSQGNCIRATPETPYLQIGETKYGKPILDR TLSYESSLDAIAKSALLSIDSTMRSNLSVGPPIDMISYAVNSLKIQHRLRLEARDPYLLKIRRYWENALKQASEAMPGVE WNRDLGQQDQDPASNGTDFL
Sequences:
>Translated_260_residues MTYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAITYQLEQEIRSGTPHNLHTIPS LYDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQIAGAPPELFLIYSQGNCIRATPETPYLQIGETKYGKPILDR TLSYESSLDAIAKSALLSIDSTMRSNLSVGPPIDMISYAVNSLKIQHRLRLEARDPYLLKIRRYWENALKQASEAMPGVE WNRDLGQQDQDPASNGTDFL >Mature_259_residues TYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAITYQLEQEIRSGTPHNLHTIPSL YDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQIAGAPPELFLIYSQGNCIRATPETPYLQIGETKYGKPILDRT LSYESSLDAIAKSALLSIDSTMRSNLSVGPPIDMISYAVNSLKIQHRLRLEARDPYLLKIRRYWENALKQASEAMPGVEW NRDLGQQDQDPASNGTDFL
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29270; Mature: 29138
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAIT CHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHH YQLEQEIRSGTPHNLHTIPSLYDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC AGAPPELFLIYSQGNCIRATPETPYLQIGETKYGKPILDRTLSYESSLDAIAKSALLSID CCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH STMRSNLSVGPPIDMISYAVNSLKIQHRLRLEARDPYLLKIRRYWENALKQASEAMPGVE HHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC WNRDLGQQDQDPASNGTDFL CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAIT HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHH YQLEQEIRSGTPHNLHTIPSLYDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC AGAPPELFLIYSQGNCIRATPETPYLQIGETKYGKPILDRTLSYESSLDAIAKSALLSID CCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHH STMRSNLSVGPPIDMISYAVNSLKIQHRLRLEARDPYLLKIRRYWENALKQASEAMPGVE HHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC WNRDLGQQDQDPASNGTDFL CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA