| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077088
Identifier: 170077088
GI number: 170077088
Start: 492657
End: 493790
Strand: Direct
Name: 170077088
Synonym: SYNPCC7002_A0462
Alternate gene names: NA
Gene position: 492657-493790 (Clockwise)
Preceding gene: 170077087
Following gene: 170077090
Centisome position: 16.38
GC content: 52.82
Gene sequence:
>1134_bases GTGATCACTTTAGATTGGAAAATTGGGTTTGAAATTGAGTTATTGGCACCAGCGGGGAGCAGTCGTCAGGATCTCGCAGA GGCGATCGCCACTGCCCAGGGGGGGCAAGTCCATCGCTTTTTTCACCCCCAATCGGAACCCAGCAAAGTACCTGGTAAAC CAGTCTTTCACAATTTAACCCTCGGCTTTGAGATTCTTGATCCCCAGCAACGGATGATCGCCCAATGTGTCGATGATCTA ACGTTACAAAAAGACCTGAAGCGCCAGGCTAAACCCCAAGCAGGTTGGTACCGCATTGTCAGTGATGATGAACGTCTGCT GCGTTTGATTGCCCGTCAAACTGATGCCAAAGCCCCTTTGGAAACCGTAATGGATCCCATCGGTGAGTTGTTTGGCACGG TACCAGAACCGGGGCCAGGGGGGATGCGGCGGGTGAATGATCAAAGCGGGGCATCCGTGGCGATCGCCGCCCCACTACCC GGAGAACGAGAACGTCCCTGTGAATTGATTACAGCGCCCCTGGAGACAGACCACGAGCATCAATTAGAAACCCTATTATC CTTAGCGCGGCACCTAAAATTTACAGCTCCCGTTGAAGGCGCAACTCACCTTCATTTTGAGGCGACGCCCCTCCAGTCAG CCCCGGCGATCGCCAATTTAGTGAATCTGTTGTGGCGCTATGGGGCTATTCTCAAAACCCTCATGGGCACCAATCCCAAC TGTCGTCGCCTCGGCCCCTGGCCCGAAACCCTCCTCACCACCGTGAACCAGCCAGAATTTCGGCAACTCCCCTGGCCCAC TGTCCAGCAACAACTCCATCGCCTCAAGCTAACAAAATATTGTGATTTTAATTTGGTGAACTGCATCAACGCCCTACCCC ACAAAAACACGATTGAAGTGCGAATTCTTCCCGTTTGGCTAGAGACAGCACCCATTCTGCAGGCCGCCTCTTTATTTACC GCTGTTTTACATTTGGCTACTCAGGGAGAGGCGATCGCCCCAGGCCCTCCAGAAAAATTCACCCGTGCCAATGTCCAAGC TCTTTTGCAACAACTGCAACTAGATCCAGCGCAAGTTGATCTTTGGTTGCAACGGGTGCCCCAAGGCAAGGCCCGGAAAA AAGGTTTTCAGTAA
Upstream 100 bases:
>100_bases TTTCTAATTGACAATCGTTTTGGGGGGTGAGCCATCATCTCCCATATTTTTTTAGATCAATTACTGACGCCAACAATACG AGAGCCGGGGAGCAAAAATC
Downstream 100 bases:
>100_bases TTTCAACGATGGAACCCTTAGATTAAGCGCTATCGCTAGGACGACAAAGGCTGACCGCACTGGGTACAAAAGCGATCGCC TGCCGTAATTGCTTGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MITLDWKIGFEIELLAPAGSSRQDLAEAIATAQGGQVHRFFHPQSEPSKVPGKPVFHNLTLGFEILDPQQRMIAQCVDDL TLQKDLKRQAKPQAGWYRIVSDDERLLRLIARQTDAKAPLETVMDPIGELFGTVPEPGPGGMRRVNDQSGASVAIAAPLP GERERPCELITAPLETDHEHQLETLLSLARHLKFTAPVEGATHLHFEATPLQSAPAIANLVNLLWRYGAILKTLMGTNPN CRRLGPWPETLLTTVNQPEFRQLPWPTVQQQLHRLKLTKYCDFNLVNCINALPHKNTIEVRILPVWLETAPILQAASLFT AVLHLATQGEAIAPGPPEKFTRANVQALLQQLQLDPAQVDLWLQRVPQGKARKKGFQ
Sequences:
>Translated_377_residues MITLDWKIGFEIELLAPAGSSRQDLAEAIATAQGGQVHRFFHPQSEPSKVPGKPVFHNLTLGFEILDPQQRMIAQCVDDL TLQKDLKRQAKPQAGWYRIVSDDERLLRLIARQTDAKAPLETVMDPIGELFGTVPEPGPGGMRRVNDQSGASVAIAAPLP GERERPCELITAPLETDHEHQLETLLSLARHLKFTAPVEGATHLHFEATPLQSAPAIANLVNLLWRYGAILKTLMGTNPN CRRLGPWPETLLTTVNQPEFRQLPWPTVQQQLHRLKLTKYCDFNLVNCINALPHKNTIEVRILPVWLETAPILQAASLFT AVLHLATQGEAIAPGPPEKFTRANVQALLQQLQLDPAQVDLWLQRVPQGKARKKGFQ >Mature_377_residues MITLDWKIGFEIELLAPAGSSRQDLAEAIATAQGGQVHRFFHPQSEPSKVPGKPVFHNLTLGFEILDPQQRMIAQCVDDL TLQKDLKRQAKPQAGWYRIVSDDERLLRLIARQTDAKAPLETVMDPIGELFGTVPEPGPGGMRRVNDQSGASVAIAAPLP GERERPCELITAPLETDHEHQLETLLSLARHLKFTAPVEGATHLHFEATPLQSAPAIANLVNLLWRYGAILKTLMGTNPN CRRLGPWPETLLTTVNQPEFRQLPWPTVQQQLHRLKLTKYCDFNLVNCINALPHKNTIEVRILPVWLETAPILQAASLFT AVLHLATQGEAIAPGPPEKFTRANVQALLQQLQLDPAQVDLWLQRVPQGKARKKGFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41952; Mature: 41952
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLDWKIGFEIELLAPAGSSRQDLAEAIATAQGGQVHRFFHPQSEPSKVPGKPVFHNLT CEEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE LGFEILDPQQRMIAQCVDDLTLQKDLKRQAKPQAGWYRIVSDDERLLRLIARQTDAKAPL ECEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHH ETVMDPIGELFGTVPEPGPGGMRRVNDQSGASVAIAAPLPGERERPCELITAPLETDHEH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEEECCCCCCHHH QLETLLSLARHLKFTAPVEGATHLHFEATPLQSAPAIANLVNLLWRYGAILKTLMGTNPN HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC CRRLGPWPETLLTTVNQPEFRQLPWPTVQQQLHRLKLTKYCDFNLVNCINALPHKNTIEV CCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE RILPVWLETAPILQAASLFTAVLHLATQGEAIAPGPPEKFTRANVQALLQQLQLDPAQVD EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH LWLQRVPQGKARKKGFQ HHHHHCCCCHHHCCCCC >Mature Secondary Structure MITLDWKIGFEIELLAPAGSSRQDLAEAIATAQGGQVHRFFHPQSEPSKVPGKPVFHNLT CEEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE LGFEILDPQQRMIAQCVDDLTLQKDLKRQAKPQAGWYRIVSDDERLLRLIARQTDAKAPL ECEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHH ETVMDPIGELFGTVPEPGPGGMRRVNDQSGASVAIAAPLPGERERPCELITAPLETDHEH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEEECCCCCCHHH QLETLLSLARHLKFTAPVEGATHLHFEATPLQSAPAIANLVNLLWRYGAILKTLMGTNPN HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC CRRLGPWPETLLTTVNQPEFRQLPWPTVQQQLHRLKLTKYCDFNLVNCINALPHKNTIEV CCCCCCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE RILPVWLETAPILQAASLFTAVLHLATQGEAIAPGPPEKFTRANVQALLQQLQLDPAQVD EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH LWLQRVPQGKARKKGFQ HHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA