| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077087
Identifier: 170077087
GI number: 170077087
Start: 491793
End: 492563
Strand: Direct
Name: 170077087
Synonym: SYNPCC7002_A0461
Alternate gene names: NA
Gene position: 491793-492563 (Clockwise)
Preceding gene: 170077086
Following gene: 170077088
Centisome position: 16.35
GC content: 48.9
Gene sequence:
>771_bases ATGACAACCACACTTTTTACCGCCCCCCGCACCCTCTTACAAATGATTGCCACTGGTGCAGTATTTGTGTCCGGATTCTC CGCCAATGTCCTTCCTACCACCGCATCCCCCTTAATCGTAAGTCCCGCCCAGGATGCGACTGATTTATTCTTTGCAGACT ACACCTGGTGCGATGCAAAAATGCTGGGGGAATTTTGGGGAGAAGGCCCCGGTAATGCCAAAGTCAGCGCTGGCAAACTC CTCCAAGACGGGGACTATCAAACTGTTGAAAGCAAATTAACGGCGGCCCGGGACTATTACAGTGGCCAAGGTCTTTGCAA CTATACTGACGAAGGCTTTAGCTATGAAGATATGGTTGTCGTCGCTGAATATTGGGATGTGTCCGTAACCGAAGCAAAAA CAACCATCGCTGACAAATTGGAATGGGGCTTACCGGGTGTTGCCCATGACATCGTTGAGATGGCCTACGCCGAGCAATCC CATTATGATCCCACCGCGATTGTCGAAACCATCGCCTTTGAGAATTTGAATCGTGATGGCCAAACTTTGGGTTATTTTGT CCAACGGGCCGATGGTCTATGGGTAGAACTCACCGCTGCCGGGGAAGAGATTTTCTACTTCAATGAAATTGAGCGGGATC CGTTAGTGGTGACTCTATTCGACGCTTCACGCAATATGGAAATTCATTTGGACTATCATTTCAATCAAATTCAATACCGC TATTCTTCTGATCAAGGTGCGCCCAAGCCCCTCTACGCCATGGGTTTCTAA
Upstream 100 bases:
>100_bases CCTAGTTGCAGTGGCGATCGCCCCACAAAGTGCATCAGTAAATAGGCAGCACAACTAAGACTGGGCAACACACAAAAATT CCCACTTAAAATCAAGAGCC
Downstream 100 bases:
>100_bases TTGACAATCGTTTTGGGGGGTGAGCCATCATCTCCCATATTTTTTTAGATCAATTACTGACGCCAACAATACGAGAGCCG GGGAGCAAAAATCGTGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTTTLFTAPRTLLQMIATGAVFVSGFSANVLPTTASPLIVSPAQDATDLFFADYTWCDAKMLGEFWGEGPGNAKVSAGKL LQDGDYQTVESKLTAARDYYSGQGLCNYTDEGFSYEDMVVVAEYWDVSVTEAKTTIADKLEWGLPGVAHDIVEMAYAEQS HYDPTAIVETIAFENLNRDGQTLGYFVQRADGLWVELTAAGEEIFYFNEIERDPLVVTLFDASRNMEIHLDYHFNQIQYR YSSDQGAPKPLYAMGF
Sequences:
>Translated_256_residues MTTTLFTAPRTLLQMIATGAVFVSGFSANVLPTTASPLIVSPAQDATDLFFADYTWCDAKMLGEFWGEGPGNAKVSAGKL LQDGDYQTVESKLTAARDYYSGQGLCNYTDEGFSYEDMVVVAEYWDVSVTEAKTTIADKLEWGLPGVAHDIVEMAYAEQS HYDPTAIVETIAFENLNRDGQTLGYFVQRADGLWVELTAAGEEIFYFNEIERDPLVVTLFDASRNMEIHLDYHFNQIQYR YSSDQGAPKPLYAMGF >Mature_255_residues TTTLFTAPRTLLQMIATGAVFVSGFSANVLPTTASPLIVSPAQDATDLFFADYTWCDAKMLGEFWGEGPGNAKVSAGKLL QDGDYQTVESKLTAARDYYSGQGLCNYTDEGFSYEDMVVVAEYWDVSVTEAKTTIADKLEWGLPGVAHDIVEMAYAEQSH YDPTAIVETIAFENLNRDGQTLGYFVQRADGLWVELTAAGEEIFYFNEIERDPLVVTLFDASRNMEIHLDYHFNQIQYRY SSDQGAPKPLYAMGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28476; Mature: 28345
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLFTAPRTLLQMIATGAVFVSGFSANVLPTTASPLIVSPAQDATDLFFADYTWCDAK CCCEEECCHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCEEHHHH MLGEFWGEGPGNAKVSAGKLLQDGDYQTVESKLTAARDYYSGQGLCNYTDEGFSYEDMVV HHHHHHCCCCCCCEEECCCEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE VAEYWDVSVTEAKTTIADKLEWGLPGVAHDIVEMAYAEQSHYDPTAIVETIAFENLNRDG EEEECCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC QTLGYFVQRADGLWVELTAAGEEIFYFNEIERDPLVVTLFDASRNMEIHLDYHFNQIQYR HHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECEEEEE YSSDQGAPKPLYAMGF ECCCCCCCCCEEECCC >Mature Secondary Structure TTTLFTAPRTLLQMIATGAVFVSGFSANVLPTTASPLIVSPAQDATDLFFADYTWCDAK CCEEECCHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCEEHHHH MLGEFWGEGPGNAKVSAGKLLQDGDYQTVESKLTAARDYYSGQGLCNYTDEGFSYEDMVV HHHHHHCCCCCCCEEECCCEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE VAEYWDVSVTEAKTTIADKLEWGLPGVAHDIVEMAYAEQSHYDPTAIVETIAFENLNRDG EEEECCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC QTLGYFVQRADGLWVELTAAGEEIFYFNEIERDPLVVTLFDASRNMEIHLDYHFNQIQYR HHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECEEEEE YSSDQGAPKPLYAMGF ECCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA